RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 SPATA25Q9BR10 227 aa12.11□□□□□ -0.47
CHFR-204ENST00000443047 NPIPB3Q92617 1050 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 MRPL32Q9BYC8 188 aaKnown RBP12.1□□□□□ -0.47
CHFR-204ENST00000443047 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
CHFR-204ENST00000443047 IGHV1-46P01743 117 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 FCER1GP30273 86 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 LOXL3P58215 753 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 PATE2Q6UY27 113 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 LCNL1Q6ZST4 164 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
CHFR-204ENST00000443047 FXYD5Q96DB9 178 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
CHFR-204ENST00000443047 A0A0G2JNJ9 132 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
CHFR-204ENST00000443047 PRNTQ86SH4 94 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 PRSS22Q9GZN4 317 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 Q9UFV3 132 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
CHFR-204ENST00000443047 A0A1B0GWB2 263 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 F8W1H4 67 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 SPINK8P0C7L1 97 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 CD40P25942 277 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 FOXC1Q12948 553 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 SOX21Q9Y651 276 aaPredicted RBP12.09□□□□□ -0.47
CHFR-204ENST00000443047 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 TCTEX1D4Q5JR98 221 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 ASCL5Q7RTU5 278 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 FAM57AQ8TBR7 257 aa12.09□□□□□ -0.47
CHFR-204ENST00000443047 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 A0A096LNJ9 63 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 CR1LQ2VPA4 569 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 MRPL16Q9NX20 251 aaKnown RBP12.08□□□□□ -0.48
CHFR-204ENST00000443047 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 A0A1B0GUT8 65 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 LHBP01229 141 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 CD69Q07108 199 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 C17orf58Q2M2W7 97 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 FOXI2Q6ZQN5 318 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
CHFR-204ENST00000443047 CSMD1Q96PZ7 3565 aa12.08□□□□□ -0.48
CHFR-204ENST00000443047 DSCAML1Q8TD84 2053 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 SVEP1Q4LDE5 3571 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 IGKV1-16P04430 117 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
CHFR-204ENST00000443047 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 FAM169BQ8N8A8 192 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 RNF183Q96D59 192 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 MLST8Q9BVC4 326 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 IGLV3-9A0A075B6K5 115 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 TCRBV4S1A1TA0A5B7 111 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 D6R8Y8 96 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 SIVA1O15304 175 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 RND1Q92730 232 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 CHAC1Q9BUX1 264 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 SIGLEC8Q9NYZ4 499 aa12.07□□□□□ -0.48
CHFR-204ENST00000443047 COL6A6A6NMZ7 2263 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 C19orf71A6NCJ1 209 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 RNF7Q9UBF6 113 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
CHFR-204ENST00000443047 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 MZT1Q08AG7 82 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 Q8NA96 180 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 PRNDQ9UKY0 176 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 HAX1O00165 279 aa12.06□□□□□ -0.48
CHFR-204ENST00000443047 RNASE2P10153 161 aaKnown RBP12.06□□□□□ -0.48
CHFR-204ENST00000443047 CHD8Q9HCK8 2581 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 IGHV3-21A0A0B4J1V1 117 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 APOMO95445 188 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 MT-ATP8P03928 68 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 OR1L4Q8NGR5 311 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 PPP1R35Q8TAP8 253 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 DPF1Q92782 380 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 JPT1Q9UK76 154 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 IGLL5B9A064 214 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 RIGQ13278 110 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 GTSCR1Q86UQ5 136 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 DDB2Q92466 427 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 GAFA1Q96PS6 74 aa12.05□□□□□ -0.48
CHFR-204ENST00000443047 DLL1O00548 723 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 BSPH1Q075Z2 132 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 GFRALQ6UXV0 394 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 GOLT1AQ6ZVE7 132 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 PLXNB1O43157 2135 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 ASH1LQ9NR48 2969 aaKnown RBP12.04□□□□□ -0.48
CHFR-204ENST00000443047 SMKR1H3BMG3 65 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 PRRG2O14669 202 aa12.04□□□□□ -0.48
CHFR-204ENST00000443047 TCRAP04437 139 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms