RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ARL2-SNX15V9GYD0 113 aa15.9■□□□□ 0.14
VPS13B-204ENST00000441350 A0A1W2PRE2 83 aa15.89■□□□□ 0.13
VPS13B-204ENST00000441350 FAM74A7A6NL05 159 aa15.89■□□□□ 0.13
VPS13B-204ENST00000441350 SLC17A3O00476 420 aa15.89■□□□□ 0.13
VPS13B-204ENST00000441350 PAGE4O60829 102 aa15.89■□□□□ 0.13
VPS13B-204ENST00000441350 UBE2G2P60604 165 aa15.89■□□□□ 0.13
VPS13B-204ENST00000441350 RPL11P62913 178 aaKnown RBP15.89■□□□□ 0.13
VPS13B-204ENST00000441350 HAGHQ16775 308 aa15.89■□□□□ 0.13
VPS13B-204ENST00000441350 RBFOX3A6NFN3 312 aa15.88■□□□□ 0.13
VPS13B-204ENST00000441350 ZNF253O75346 499 aa15.88■□□□□ 0.13
VPS13B-204ENST00000441350 IFNA1P01562 189 aa15.88■□□□□ 0.13
VPS13B-204ENST00000441350 BCL2P10415 239 aa15.88■□□□□ 0.13
VPS13B-204ENST00000441350 NRN1Q9NPD7 142 aa15.88■□□□□ 0.13
VPS13B-204ENST00000441350 LOC102723971A0A1B0GUV8 181 aa15.87■□□□□ 0.13
VPS13B-204ENST00000441350 SAP30O75446 220 aa15.87■□□□□ 0.13
VPS13B-204ENST00000441350 RANP62826 216 aaKnown RBP15.87■□□□□ 0.13
VPS13B-204ENST00000441350 RARRES2Q99969 163 aa15.87■□□□□ 0.13
VPS13B-204ENST00000441350 ANK2Q01484 3957 aa15.87■□□□□ 0.13
VPS13B-204ENST00000441350 TAGLN2P37802 199 aaKnown RBP15.86■□□□□ 0.13
VPS13B-204ENST00000441350 CD300EQ496F6 205 aaPredicted RBP15.86■□□□□ 0.13
VPS13B-204ENST00000441350 TMEM61Q8N0U2 210 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 LYPD1Q8N2G4 141 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 MS4A6AQ9H2W1 248 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 ZNF331Q9NQX6 463 aaPredicted RBP15.86■□□□□ 0.13
VPS13B-204ENST00000441350 TRRAPQ9Y4A5 3859 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 RAB19A4D1S5 217 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 GGTLC3B5MD39 225 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 SOCS3O14543 225 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 IGLV1-51P01701 117 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 ICAM4Q14773 271 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 TOR2AQ5JU69 321 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 ZNF506Q5JVG8 444 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 DCANP1Q8TF63 244 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 VAX2Q9UIW0 290 aa15.86■□□□□ 0.13
VPS13B-204ENST00000441350 IGKV3-7A0A075B6H7 116 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 TRAV25A0A0B4J276 109 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 TSPAN4O14817 238 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 PSG9Q00887 426 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 CST9LP1Q5W188 147 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 COMMD7Q86VX2 200 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 SLC50A1Q9BRV3 221 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 NKX6-2Q9C056 277 aaPredicted RBP15.85■□□□□ 0.13
VPS13B-204ENST00000441350 Q9H3A6 140 aa15.85■□□□□ 0.13
VPS13B-204ENST00000441350 TRAV8-2A0A0B4J237 113 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 CD33P20138 364 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 ATP5G3P48201 142 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 SRSF3P84103 164 aaKnown RBP15.84■□□□□ 0.13
VPS13B-204ENST00000441350 MEF2BQ02080 365 aaPredicted RBP15.84■□□□□ 0.13
VPS13B-204ENST00000441350 RBPMS2Q6ZRY4 209 aaKnown RBP15.84■□□□□ 0.13
VPS13B-204ENST00000441350 CCDC28AQ8IWP9 274 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 EXOC3-AS1Q8N2X6 119 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 GBGT1Q8N5D6 347 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 TXNDC17Q9BRA2 123 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 EIF5A2Q9GZV4 153 aaKnown RBP15.84■□□□□ 0.13
VPS13B-204ENST00000441350 OTORQ9NRC9 128 aa15.84■□□□□ 0.13
VPS13B-204ENST00000441350 C11orf94C9JXX5 98 aa15.83■□□□□ 0.13
VPS13B-204ENST00000441350 SUMO1P63165 101 aaKnown RBP15.83■□□□□ 0.13
VPS13B-204ENST00000441350 INSL3P51460 131 aa15.83■□□□□ 0.12
VPS13B-204ENST00000441350 CD81P60033 236 aa15.83■□□□□ 0.12
VPS13B-204ENST00000441350 SAMD13Q5VXD3 122 aa15.83■□□□□ 0.12
VPS13B-204ENST00000441350 IGFL4Q6B9Z1 124 aa15.83■□□□□ 0.12
VPS13B-204ENST00000441350 OR2K2Q8NGT1 345 aa15.83■□□□□ 0.12
VPS13B-204ENST00000441350 RXFP4Q8TDU9 374 aa15.83■□□□□ 0.12
VPS13B-204ENST00000441350 MCRIP2Q9BUT9 160 aaKnown RBP15.83■□□□□ 0.12
VPS13B-204ENST00000441350 TRAV2A0A0B4J234 112 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 IZUMO1RA6ND01 250 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 PGPA6NDG6 321 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 K7EQG2 157 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 ISLRO14498 428 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 PAFAH1B2P68402 229 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 C9orf66Q5T8R8 295 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 EIF4E3Q8N5X7 224 aaKnown RBP15.82■□□□□ 0.12
VPS13B-204ENST00000441350 C16orf92Q96LL3 132 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 AAMDCQ9H7C9 122 aa15.82■□□□□ 0.12
VPS13B-204ENST00000441350 DNASE2O00115 360 aaPredicted RBP15.81■□□□□ 0.12
VPS13B-204ENST00000441350 NDUFA5Q16718 116 aa15.81■□□□□ 0.12
VPS13B-204ENST00000441350 SMDT1Q9H4I9 107 aa15.81■□□□□ 0.12
VPS13B-204ENST00000441350 HLA-DMBP28068 263 aa15.8■□□□□ 0.12
VPS13B-204ENST00000441350 TFPI2P48307 235 aa15.8■□□□□ 0.12
VPS13B-204ENST00000441350 PEA15Q15121 130 aa15.8■□□□□ 0.12
VPS13B-204ENST00000441350 KRTAP21-3Q3LHN1 58 aa15.8■□□□□ 0.12
VPS13B-204ENST00000441350 WFDC3Q8IUB2 231 aa15.8■□□□□ 0.12
VPS13B-204ENST00000441350 SPAG8Q99932 426 aaPredicted RBP15.8■□□□□ 0.12
VPS13B-204ENST00000441350 CLEC5AQ9NY25 188 aa15.8■□□□□ 0.12
VPS13B-204ENST00000441350 C9JQL5 133 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 NDUFS6O75380 124 aaKnown RBP15.79■□□□□ 0.12
VPS13B-204ENST00000441350 SLC7A5P1Q8MH63 180 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 RNF182Q8N6D2 247 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 C5orf17Q8NAS9 161 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 PRELID1Q9Y255 219 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 NOTCH3Q9UM47 2321 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 M0R3E3 92 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 UQCC3Q6UW78 93 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 FAM24BQ8N5W8 94 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 C20orf173Q96LM9 149 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 TCEAL7Q9BRU2 100 aa15.79■□□□□ 0.12
VPS13B-204ENST00000441350 ZNF256Q9Y2P7 627 aaPredicted RBP15.79■□□□□ 0.12
VPS13B-204ENST00000441350 WIPF1O43516 503 aa15.78■□□□□ 0.12
VPS13B-204ENST00000441350 PDE6DO43924 150 aa15.78■□□□□ 0.12
VPS13B-204ENST00000441350 SLC25A5P05141 298 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms