RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DPPA3Q6W0C5 159 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 LINC00322Q6ZN03 302 aaPredicted RBP13.12□□□□□ -0.31
CCDC188-201ENST00000439765 APRG1Q8IVJ8 170 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 FAM24BQ8N5W8 94 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 MUC7Q8TAX7 377 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
CCDC188-201ENST00000439765 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 CDC34P49427 236 aaPredicted RBP13.11□□□□□ -0.31
CCDC188-201ENST00000439765 FHITP49789 147 aa13.11□□□□□ -0.31
CCDC188-201ENST00000439765 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
CCDC188-201ENST00000439765 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
CCDC188-201ENST00000439765 RNF141Q8WVD5 230 aa13.11□□□□□ -0.31
CCDC188-201ENST00000439765 SCRT1Q9BWW7 348 aa13.11□□□□□ -0.31
CCDC188-201ENST00000439765 TRAV5A0A0B4J249 113 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 HELTA6NFD8 242 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 FAM213BQ8TBF2 198 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 RAB24Q969Q5 203 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 SLC25A22Q9H936 323 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 RETNQ9HD89 108 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC188-201ENST00000439765 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 DCANP1Q8TF63 244 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 RNF24Q9Y225 148 aa13.1□□□□□ -0.31
CCDC188-201ENST00000439765 LOC102724200A0A096LPH7 203 aaPredicted RBP13.09□□□□□ -0.31
CCDC188-201ENST00000439765 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 K7EQG2 157 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 FAM167A-AS1Q96KT0 104 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
CCDC188-201ENST00000439765 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
CCDC188-201ENST00000439765 HMGB3O15347 200 aaKnown RBP13.08□□□□□ -0.32
CCDC188-201ENST00000439765 STAG3L2P0CL84 134 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 STAG3L3P0CL85 134 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.32
CCDC188-201ENST00000439765 TAS2R45P59539 299 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 DEFB131AP59861 70 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 ZNF767PQ75MW2 155 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 MBD3L1Q8WWY6 194 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 SLC25A2Q9BXI2 301 aa13.08□□□□□ -0.32
CCDC188-201ENST00000439765 AGRNO00468 2067 aa13.07□□□□□ -0.32
CCDC188-201ENST00000439765 LRRC20Q8TCA0 184 aa13.07□□□□□ -0.32
CCDC188-201ENST00000439765 SAT2Q96F10 170 aaPredicted RBP13.07□□□□□ -0.32
CCDC188-201ENST00000439765 NRN1Q9NPD7 142 aa13.07□□□□□ -0.32
CCDC188-201ENST00000439765 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 H2AFB1P0C5Y9 115 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 RPL7P18124 248 aaKnown RBP13.06□□□□□ -0.32
CCDC188-201ENST00000439765 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 KHDC3LQ587J8 217 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 LCN15Q6UWW0 184 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 GPR82Q96P67 336 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 EDA2RQ9HAV5 297 aa13.06□□□□□ -0.32
CCDC188-201ENST00000439765 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
CCDC188-201ENST00000439765 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
CCDC188-201ENST00000439765 CMC4P56277 68 aaPredicted RBP13.05□□□□□ -0.32
CCDC188-201ENST00000439765 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 SFT2D1Q8WV19 159 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 OR51M1Q9H341 326 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
CCDC188-201ENST00000439765 OR7C2O60412 319 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 FGF8P55075 233 aaPredicted RBP13.04□□□□□ -0.32
CCDC188-201ENST00000439765 PSMG4Q5JS54 123 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 CXorf1O96002 111 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 PYYP10082 97 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 GALR1P47211 349 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 APOC4P55056 127 aa13.04□□□□□ -0.32
CCDC188-201ENST00000439765 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
CCDC188-201ENST00000439765 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
CCDC188-201ENST00000439765 TEX46H3BTG2 121 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 RGS13O14921 159 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 HBE1P02100 147 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 IGLC2P0DOY2 106 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
CCDC188-201ENST00000439765 GCHFRP30047 84 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 SNRPD3P62318 126 aaKnown RBP13.02□□□□□ -0.33
CCDC188-201ENST00000439765 DEFB135Q30KP9 77 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 PCNPQ8WW12 178 aaKnown RBP13.02□□□□□ -0.33
CCDC188-201ENST00000439765 FXYD5Q96DB9 178 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 HRH4Q9H3N8 390 aa13.02□□□□□ -0.33
CCDC188-201ENST00000439765 A0A1B0GV50 99 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 KNCNA6PVL3 124 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 H3BQ15 152 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 NMBP08949 121 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 OR10J4P0C629 311 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 ATF4P18848 351 aaPredicted RBP13.01□□□□□ -0.33
CCDC188-201ENST00000439765 STHQ8IWL8 128 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 LYPD6BQ8NI32 183 aa13.01□□□□□ -0.33
CCDC188-201ENST00000439765 SUN5Q8TC36 379 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms