RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GPR82Q96P67 336 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 CCL19Q99731 98 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 ANXA2RQ3ZCQ2 193 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 PIP4P2Q8N4L2 257 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 NPIPB3Q92617 1050 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 ABHD17AQ96GS6 310 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 SPANXB1Q9NS25 103 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-202ENST00000435070 DKK2Q9UBU2 259 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 SRSF12Q8WXF0 261 aaKnown RBP6.03□□□□□ -1.44
CPSF6-202ENST00000435070 ZNRD1Q9P1U0 126 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 EPDR1Q9UM22 224 aa6.03□□□□□ -1.44
CPSF6-202ENST00000435070 COL5A1P20908 1838 aaPredicted RBP6.02□□□□□ -1.44
CPSF6-202ENST00000435070 ZNF414Q96IQ9 312 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 UBE2E2Q96LR5 201 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 DCHS1Q96JQ0 3298 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 LTBP2Q14767 1821 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 CGB1A6NKQ9 187 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 C5orf67F2Z3F1 127 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 PRNTQ86SH4 94 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 RIGQ13278 110 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 OR1L8Q8NGR8 309 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 PF4P02776 101 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 PMS2CLQ68D20 193 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 INO80CQ6PI98 192 aaPredicted RBP6.02□□□□□ -1.45
CPSF6-202ENST00000435070 ZNRF1Q8ND25 227 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 OR4X2Q8NGF9 303 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 PHLDA1Q8WV24 401 aaPredicted RBP6.02□□□□□ -1.45
CPSF6-202ENST00000435070 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
CPSF6-202ENST00000435070 A0A1W2PQM1 296 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 SPINK8P0C7L1 97 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 LINC00305Q7Z4B0 112 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 OR9G4Q8NGQ1 327 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 ITLN1Q8WWA0 313 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 MAP1LC3AQ9H492 121 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 IGHV1-45A0A0A0MS14 117 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 IGKV3OR2-268A0A0C4DH90 116 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 NXPH1P58417 271 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 LY6EQ16553 131 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 RNF183Q96D59 192 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 IGHV3OR16-10A0A075B7F0 116 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 CLPSL1A2RUU4 121 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 SMKR1H3BMG3 65 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 MPV17P39210 176 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 PATE2Q6UY27 113 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 EPOPA6NHQ4 379 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 COX6A1P12074 109 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 SYT8Q8NBV8 401 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 ZNF479Q96JC4 524 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 IMMP1LQ96LU5 166 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 DUX5Q96PT3 197 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 C7orf69Q9H7B7 122 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 TRAV12-3A0A0B4J271 114 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 IFI27L2Q9H2X8 130 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 FBXL15Q9H469 300 aa6.01□□□□□ -1.45
CPSF6-202ENST00000435070 PATE3B3GLJ2 98 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 IGKV1-16P04430 117 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 C10orf55Q5SWW7 151 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 RNF7Q9UBF6 113 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 PKDREJQ9NTG1 2253 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 CACNA1BQ00975 2339 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 GTSCR1Q86UQ5 136 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 YAE1D1Q9NRH1 226 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 A0A1B0GUT8 65 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 D6R8Y8 96 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 HOXA3O43365 443 aaPredicted RBP6□□□□□ -1.45
CPSF6-202ENST00000435070 ATP5LO75964 103 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 MT-ATP8P03928 68 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 GOLT1AQ6ZVE7 132 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 FXYD5Q96DB9 178 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 IGHV5-10-1A0A0J9YXX1 117 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 CCL4P13236 92 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 IFI27L1Q96BM0 104 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 SPANXA1Q9NS26 97 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 TMEM189A5PLL7 270 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 SRRM4A7MD48 611 aaKnown RBP6□□□□□ -1.45
CPSF6-202ENST00000435070 PRR33A8MZF0 331 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 C15orf65H3BRN8 121 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 SS18L1O75177 396 aaPredicted RBP6□□□□□ -1.45
CPSF6-202ENST00000435070 WISP2O76076 250 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 CD69Q07108 199 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 CR1LQ2VPA4 569 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 GAGE13Q4V321 117 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 FAM201AQ5SY85 155 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 MRPL14Q6P1L8 145 aaKnown RBP6□□□□□ -1.45
CPSF6-202ENST00000435070 CD177Q8N6Q3 437 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 OR5AN1Q8NGI8 311 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 CHAC1Q9BUX1 264 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 TMEM14BQ9NUH8 114 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 CACNA1GO43497 2377 aa6□□□□□ -1.45
CPSF6-202ENST00000435070 A0A096LNJ9 63 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 TCRBV4S1A1TA0A5B7 111 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 NPIPB6E9PJ23 425 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 B5MCH6 92 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 CDK2AP2O75956 126 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 GHRHP01286 108 aa5.99□□□□□ -1.45
CPSF6-202ENST00000435070 SAA2P0DJI9 122 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms