RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 APOC4P55056 127 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
SMARCA4-203ENST00000429416 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 STAG3L2P0CL84 134 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 STAG3L3P0CL85 134 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 CFHR3Q02985 330 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 DAD1P61803 113 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 RAB37Q96AX2 223 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 PLXNB3Q9ULL4 1909 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 TRAV8-1A0A0A6YYK1 113 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 MRAP2Q96G30 205 aa13.64□□□□□ -0.23
SMARCA4-203ENST00000429416 LHBP01229 141 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 GFI1BQ5VTD9 330 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 IMMP2LQ96T52 175 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 RFNGQ9Y644 331 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 TCRAP04437 139 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 GZMBP10144 247 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 ERCC8Q13216 396 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 LYRM7Q5U5X0 104 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 ARL6IP6Q8N6S5 226 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 CACNG7P62955 275 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 NDUFA4O00483 81 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 RPL36AP83881 106 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 OR11H6Q8NGC7 330 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 RPL36ALQ969Q0 106 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 DPH3P1Q9H4G8 78 aa13.63□□□□□ -0.23
SMARCA4-203ENST00000429416 TRBV9A0A0B4J1U6 114 aa13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 SHANK2-AS3Q9BTD1 123 aa13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 SSBP4Q9BWG4 385 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 JKAMPQ9P055 326 aa13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 IGLV3-1P01715 115 aa13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 A0A1B0GW15 77 aa13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 WT1-ASQ06250 92 aa13.62□□□□□ -0.23
SMARCA4-203ENST00000429416 HOXD3P31249 432 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 IFI27P40305 119 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 OBSL1O75147 1896 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 NAV3Q8IVL0 2385 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 EVI2AP22794 236 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 SOX21Q9Y651 276 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 ADARB2-AS1A8MUL3 147 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 RPP25LQ8N5L8 163 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 OCC1Q8TAD7 63 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 AGMATQ9BSE5 352 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 KNCNA6PVL3 124 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 C1QL4Q86Z23 238 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 VCX2Q9H322 139 aa13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 MRPL27Q9P0M9 148 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-203ENST00000429416 INAFM1C9JVW0 142 aa13.6□□□□□ -0.23
SMARCA4-203ENST00000429416 H3BRM9 83 aa13.6□□□□□ -0.23
SMARCA4-203ENST00000429416 PLA2G2AP14555 144 aa13.6□□□□□ -0.23
SMARCA4-203ENST00000429416 YPEL3P61236 119 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-203ENST00000429416 M0R143 59 aa13.6□□□□□ -0.23
SMARCA4-203ENST00000429416 RPL23P62829 140 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-203ENST00000429416 IZUMO1RA6ND01 250 aa13.59□□□□□ -0.23
SMARCA4-203ENST00000429416 F2Z2F3 143 aa13.59□□□□□ -0.23
SMARCA4-203ENST00000429416 FGF23Q9GZV9 251 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-203ENST00000429416 WNK1Q9H4A3 2382 aa13.59□□□□□ -0.23
SMARCA4-203ENST00000429416 BCL6BQ8N143 479 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-203ENST00000429416 ZNF876PQ49A33 203 aa13.58□□□□□ -0.23
SMARCA4-203ENST00000429416 ST6GALNAC6Q969X2 333 aa13.58□□□□□ -0.23
SMARCA4-203ENST00000429416 MSMPQ1L6U9 139 aa13.58□□□□□ -0.24
SMARCA4-203ENST00000429416 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-203ENST00000429416 KLK9Q9UKQ9 250 aa13.58□□□□□ -0.24
SMARCA4-203ENST00000429416 FOLR2P14207 255 aa13.58□□□□□ -0.24
SMARCA4-203ENST00000429416 ZNF414Q96IQ9 312 aa13.58□□□□□ -0.24
SMARCA4-203ENST00000429416 SLURP1P55000 103 aa13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 FOXC2Q99958 501 aa13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 LOXL1Q08397 574 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 CD28P10747 220 aa13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 PRR14LQ5THK1 2151 aa13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 CENPFP49454 3210 aa13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 LGALS1P09382 135 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-203ENST00000429416 TRAV8-6A0A0B4J262 113 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 J3QR89 54 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 HINT1P49773 126 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 C9orf66Q5T8R8 295 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 LRRC75A-AS1Q8N1F1 130 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 TMEM131Q92545 1883 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 TRAV12-2A0A075B6T6 113 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 ATP5LO75964 103 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 MBD3L1Q8WWY6 194 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 HIST1H4GQ99525 98 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 SH2D1AO60880 128 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 A0A087WWL8 130 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 LYPD1Q8N2G4 141 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 NUDT10Q8NFP7 164 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 NUDT11Q96G61 164 aa13.56□□□□□ -0.24
SMARCA4-203ENST00000429416 C22orf34Q6ZV56 151 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 OR11H2Q8NH07 326 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 AMBPP02760 352 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 PRR31Q5SQ13 230 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 ATOH7Q8N100 152 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 OSTCQ9NRP0 149 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 IGHV7-4-1A0A0J9YVY3 117 aa13.55□□□□□ -0.24
SMARCA4-203ENST00000429416 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms