RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CKS1BP61024 79 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 UBE2D3P61077 147 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 UBE2D2P62837 147 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 PPP1R32Q7Z5V6 425 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 ZNF502Q8TBZ5 544 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 FMC1Q96HJ9 113 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 GP9P14770 177 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 WT1-ASQ06250 92 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 ZNF414Q96IQ9 312 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 FBLL1A6NHQ2 334 aaKnown RBP4.09□□□□□ -1.75
RIF1-203ENST00000428287 RAB9AP51151 201 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 SPINK9Q5DT21 86 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 HBDP02042 147 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 CD7P09564 240 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 ZNF672Q499Z4 452 aaPredicted RBP4.09□□□□□ -1.75
RIF1-203ENST00000428287 BCL6BQ8N143 479 aaPredicted RBP4.09□□□□□ -1.75
RIF1-203ENST00000428287 MRAP2Q96G30 205 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 GNG12Q9UBI6 72 aa4.09□□□□□ -1.75
RIF1-203ENST00000428287 P01737 135 aa4.09□□□□□ -1.76
RIF1-203ENST00000428287 TCRAP04437 139 aa4.09□□□□□ -1.76
RIF1-203ENST00000428287 EVI2AP22794 236 aa4.09□□□□□ -1.76
RIF1-203ENST00000428287 COL8A1P27658 744 aa4.09□□□□□ -1.76
RIF1-203ENST00000428287 KLF14Q8TD94 323 aaPredicted RBP4.09□□□□□ -1.76
RIF1-203ENST00000428287 TMEM14CQ9P0S9 112 aa4.09□□□□□ -1.76
RIF1-203ENST00000428287 KMT2BQ9UMN6 2715 aaPredicted RBP4.09□□□□□ -1.76
RIF1-203ENST00000428287 IGHV3-9P01782 118 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 CRIP1P50238 77 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 C1orf229Q6ZS94 237 aaPredicted RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 WFDC8Q8IUA0 241 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 WI2-2373I1.2A0A1W2PRP0 233 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 FAM104BQ5XKR9 115 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 FAM234AQ9H0X4 552 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 SERTAD4Q9NUC0 356 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 RPUSD1Q9UJJ7 312 aaKnown RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 WNT9BO14905 357 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 IGLV1-44P01699 117 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 APOA2P02652 100 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 ARMS2P0C7Q2 107 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 FCGR2BP31994 310 aaPredicted RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 PDE6HQ13956 83 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 TRAV8-1A0A0A6YYK1 113 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 E7EUB6 86 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 Q6ZS52 159 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 TRBV7-3A0A075B6L6 115 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 KBTBD11-OT1A0A1B0GTJ5 212 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 A0A1W2PRD5 423 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 A0A1W2PRF3 423 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 A0A1W2PRM7 423 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 H3BMG7 143 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 GNG7O60262 68 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 PYYP10082 97 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 LINC00696Q6ZRV3 163 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 PDPNQ86YL7 162 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 FAM169BQ8N8A8 192 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 C1orf162Q8NEQ5 155 aaPredicted RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 IGKV1D-17A0A075B6S4 117 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 RIGQ13278 110 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 MLANAQ16655 118 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 CFAP126Q5VTH2 177 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 TMUB1Q9BVT8 246 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 VCX2Q9H322 139 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 C17orf58Q2M2W7 97 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 MORN3Q6PF18 240 aaPredicted RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 C8orf86Q6ZUL3 223 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 MCRIP2Q9BUT9 160 aaKnown RBP4.08□□□□□ -1.76
RIF1-203ENST00000428287 METRNQ9UJH8 293 aa4.08□□□□□ -1.76
RIF1-203ENST00000428287 TEX50A0A1B0GTY4 177 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 TM4SF5O14894 197 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 NHLRC4P0CG21 123 aaPredicted RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 INO80CQ6PI98 192 aaPredicted RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 SH2D6Q7Z4S9 175 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 TUSC5Q8IXB3 177 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 NDUFS7O75251 213 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 NCR2O95944 276 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 PRDX2P32119 198 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 ERHP84090 104 aaKnown RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 OR4C13Q8NGP0 309 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 SMCPP49901 116 aaPredicted RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 FABP6P51161 128 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 MDP1Q86V88 176 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 PRSS3P2Q8NHM4 247 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 MRPL36Q9P0J6 103 aaKnown RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 HIVEP1P15822 2718 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 NTN3O00634 580 aaPredicted RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 IFI27P40305 119 aaPredicted RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 MEOX1P50221 254 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 SUB1P53999 127 aaKnown RBP eCLIP4.07□□□□□ -1.76
RIF1-203ENST00000428287 CACNG7P62955 275 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 Q6ZUT4 128 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 PGPA6NDG6 321 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 IGKV1-17P01599 117 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 IGFBP4P22692 258 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 LOXL1Q08397 574 aaPredicted RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 FHL3Q13643 280 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms