RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 GP9P14770 177 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 GAS1P54826 345 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 TRGV9Q99603 122 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 CACNA1HO95180 2353 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 TMEM14DPA8MWL7 114 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 WBP1Q96G27 269 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 GAFA1Q96PS6 74 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 A0A096LPF7 62 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 IGHG3P01860 377 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 ELANEP08246 267 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 SPART-AS1P0CW21 52 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 ZFAND6Q6FIF0 208 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 XAF1Q6GPH4 301 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 TIMM21Q9BVV7 248 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 C5orf66Q9H5L9 145 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 ATG2BQ96BY7 2078 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 DPRXA6NFQ7 191 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 TMEM14BQ9NUH8 114 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 IGHV3-16A0A0C4DH30 117 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 TFF1P04155 84 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 PRB1P04280 392 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 LY6G5BQ8NDX9 201 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 PRSS33Q8NF86 280 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 SMPXQ9UHP9 88 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 SPCS1Q9Y6A9 102 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 POLR2AP24928 1970 aaKnown RBP4.66□□□□□ -1.66
HERC4-206ENST00000427635 TCF15Q12870 199 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 MPV17L2Q567V2 206 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 IGLV3-32A0A0A0MS00 114 aa4.66□□□□□ -1.66
HERC4-206ENST00000427635 TRBV6-7A0A0A0MS04 114 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 IGHV1-24A0A0C4DH33 117 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 A0A0J9YY99 117 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 H0YJW9 148 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 DUTP33316 252 aaKnown RBP4.65□□□□□ -1.66
HERC4-206ENST00000427635 RPL23P62829 140 aaKnown RBP4.65□□□□□ -1.66
HERC4-206ENST00000427635 C14orf177Q52M58 125 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 PIFOQ8TCI5 191 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 DSCR8Q96T75 97 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 SPAG17Q6Q759 2223 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 hADV29S1A0JD25 119 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 PMS2P5A8MQ11 134 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 SH2D1AO60880 128 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 TCRAP04437 139 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 MCM3APO60318 1980 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 ADAMTSL1Q8N6G6 1762 aa4.65□□□□□ -1.66
HERC4-206ENST00000427635 ETDCA0A1B0GVM5 59 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 SRRM5B3KS81 715 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 C4orf51C9J302 202 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 SPINK13Q1W4C9 94 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 ZNF625Q96I27 306 aaPredicted RBP4.65□□□□□ -1.67
HERC4-206ENST00000427635 SCRT1Q9BWW7 348 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 SCRT2Q9NQ03 307 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 MRPL27Q9P0M9 148 aaKnown RBP4.65□□□□□ -1.67
HERC4-206ENST00000427635 ARID1BQ8NFD5 2236 aaPredicted RBP4.65□□□□□ -1.67
HERC4-206ENST00000427635 SMCHD1A6NHR9 2005 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 PYYP10082 97 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 KLF17Q5JT82 389 aaPredicted RBP4.65□□□□□ -1.67
HERC4-206ENST00000427635 CBLN2Q8IUK8 224 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 TIMM17AQ99595 171 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 MRPL36Q9P0J6 103 aaKnown RBP4.65□□□□□ -1.67
HERC4-206ENST00000427635 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 ATP6V0E1O15342 81 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 BUB3O43684 328 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 DANCRP0C864 163 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 ATP5G3P48201 142 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 RHOHQ15669 191 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 ZNF319Q9P2F9 582 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 FBLN5Q9UBX5 448 aa4.65□□□□□ -1.67
HERC4-206ENST00000427635 CHD5Q8TDI0 1954 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 I3L3M4 83 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 LY6HO94772 140 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 CRYGBP07316 175 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 LYPD2Q6UXB3 125 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 A0A1W2PRE2 83 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 NDUFB1O75438 58 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 HIST2H2BCQ6DN03 193 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 HIST2H2BDQ6DRA6 164 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 MGST2Q99735 147 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 TDRD6O60522 2096 aaKnown RBP4.64□□□□□ -1.67
HERC4-206ENST00000427635 KNCNA6PVL3 124 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 NDUFA4O00483 81 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 TSKUQ8WUA8 353 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 CHCHD1Q96BP2 118 aaKnown RBP4.64□□□□□ -1.67
HERC4-206ENST00000427635 KLK9Q9UKQ9 250 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 ZFHX2Q9C0A1 2572 aaPredicted RBP4.64□□□□□ -1.67
HERC4-206ENST00000427635 SCN1AP35498 2009 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 IGHV1OR15-1A0A075B7D0 117 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 IGKV1-5P01602 117 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 IGLV2-23P01705 113 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 CXCL3P19876 107 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 CCL20P78556 96 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 FAM120AOSQ5T036 256 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 LYPD1Q8N2G4 141 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 C8orf31Q8N9H6 132 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 RNF138Q8WVD3 245 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 PLXNA1Q9UIW2 1896 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 F6UB75 175 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 TBX6O95947 436 aaPredicted RBP4.64□□□□□ -1.67
HERC4-206ENST00000427635 PFN2P35080 140 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms