RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 HTR1DP28221 377 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 SUB1P53999 127 aaKnown RBP eCLIP11.39□□□□□ -0.592e-7■■□□□ 14.2
MSH5-206ENST00000423982 ARF6P62330 175 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 NEU4Q8WWR8 484 aaPredicted RBP11.39□□□□□ -0.59
MSH5-206ENST00000423982 C1RLQ9NZP8 487 aa11.39□□□□□ -0.59
MSH5-206ENST00000423982 C2orf91Q6ZV80 131 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 Q86TA4 180 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 FMC1Q96HJ9 113 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
MSH5-206ENST00000423982 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.38□□□□□ -0.59
MSH5-206ENST00000423982 PPIAL4DF5H284 164 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 IGLV2-11P01706 119 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 LOXL1Q08397 574 aaPredicted RBP11.38□□□□□ -0.59
MSH5-206ENST00000423982 TMEM116Q8NCL8 245 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 NDFIP1Q9BT67 221 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 NGBQ9NPG2 151 aa11.38□□□□□ -0.59
MSH5-206ENST00000423982 LYZP61626 148 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 FBXL19-AS1Q494R0 122 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 INS-IGF2F8WCM5 200 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 CD3EP07766 207 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 C12orf54Q6X4T0 127 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 SRSF12Q8WXF0 261 aaKnown RBP11.37□□□□□ -0.59
MSH5-206ENST00000423982 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 GPR183P32249 361 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 PET117Q6UWS5 81 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
MSH5-206ENST00000423982 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 E7EQL1 145 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 HLA-DRB1P01911 266 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 CT83Q5H943 113 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 TEX36Q5VZQ5 186 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 VSTM2AQ8TAG5 236 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 SAP30O75446 220 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 CRYGCP07315 174 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 LINC01545Q5VT33 79 aa11.36□□□□□ -0.59
MSH5-206ENST00000423982 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
MSH5-206ENST00000423982 POLQO75417 2590 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 PPBPP02775 128 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
MSH5-206ENST00000423982 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 CCL17Q92583 94 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 A0A1W2PRD5 423 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 A0A1W2PRF3 423 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 A0A1W2PRM7 423 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 A1L4Q6 167 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 C7orf71A4D174 169 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 HAX1O00165 279 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 TNFRSF1AP19438 455 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 ZNF747Q9BV97 191 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 AP5S1Q9NUS5 200 aa11.35□□□□□ -0.59
MSH5-206ENST00000423982 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
MSH5-206ENST00000423982 CD5LO43866 347 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
MSH5-206ENST00000423982 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 TRGV9Q99603 122 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 HSPB8Q9UJY1 196 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 VMA21Q3ZAQ7 101 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 CTSZQ9UBR2 303 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
MSH5-206ENST00000423982 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 A0A096LNJ9 63 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 COX8AP10176 69 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 NUP37Q8NFH4 326 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 HIGD1AQ9Y241 93 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 CRIP1P50238 77 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 OR4A5Q8NH83 315 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 PRSS3P2Q8NHM4 247 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
MSH5-206ENST00000423982 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
MSH5-206ENST00000423982 RBP4P02753 201 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
MSH5-206ENST00000423982 IGFBPL1Q8WX77 278 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 TMEM186Q96B77 213 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 JMJD8Q96S16 334 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 S4R3C0 116 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 A0A1W2PPR1 153 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 M0R3E3 92 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
MSH5-206ENST00000423982 SERTM2A0A1B0GWG4 89 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 MEF2CQ06413 473 aaPredicted RBP11.31□□□□□ -0.6
MSH5-206ENST00000423982 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms