RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 C17orf98A8MV24 154 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 H3BQF6 201 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CTSDP07339 412 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 BLCAPP62952 87 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 FOXF1Q12946 379 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 EBI3Q14213 229 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 PYY3Q5JQD4 70 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 FRMPD1Q5SYB0 1578 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 C9orf153Q5TBE3 101 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 NRKQ7Z2Y5 1582 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SLC35E3Q7Z769 313 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 KTN1Q86UP2 1357 aaKnown RBP3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q8N2B8 174 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SVBPQ8N300 66 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CYB561D1Q8N8Q1 229 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TMEM105Q8N8V8 129 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q8NDZ9 215 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 AQP3Q92482 292 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MRPS24Q96EL2 167 aaKnown RBP3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MAGI1Q96QZ7 1491 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 NSD3Q9BZ95 1437 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ANKRD26Q9UPS8 1709 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 HSPE1-MOB4S4R3N1 261 aa3.57□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ANAPC1Q9H1A4 1944 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 H3BQ85 93 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 K7EM74 188 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SDCBPO00560 298 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CREBL2O60519 120 aaPredicted RBP3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 GAS8-AS1O95177 125 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SLC25A4P12235 298 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 FABP4P15090 132 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CD24P25063 80 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 FUSP35637 526 aaKnown RBP eCLIP3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 PCBD1P61457 104 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 UBA52P62987 128 aaKnown RBP3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 DPPA3Q6W0C5 159 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q6ZQT7 251 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 DYNAPQ8N1N2 210 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 RPRMLQ8N4K4 120 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 PRO1933Q9H354 126 aa3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 RPL26L1Q9UNX3 145 aaKnown RBP3.56□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CFTRP13569 1480 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 IGKV3D-15A0A087WSY6 115 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 APOC4-APOC2K7ER74 178 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TIMM17BO60830 172 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ZNF737O75373 536 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 APOC2P02655 101 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 PMP2P02689 132 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 RBP4P02753 201 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ZNF705BP0CI00 300 aaPredicted RBP3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CCL4P13236 92 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SS18Q15532 418 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 FGF13Q92913 245 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 BCL2L10Q9HD36 194 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SERP1Q9Y6X1 66 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ADGRB1O14514 1584 aa3.55□□□□□ -1.84
PTP4A1P1-201ENST00000420539 NISCHQ9Y2I1 1504 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SCN8AQ9UQD0 1980 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MYH13Q9UKX3 1938 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CCDC88AQ3V6T2 1871 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 OR51F1A6NGY5 319 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MCRIP1C9JLW8 97 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 DNAH10OSP0CZ25 163 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CRYGAP11844 174 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 NFYAP23511 347 aaPredicted RBP3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ZNF117Q03924 483 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 FUT5Q11128 374 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MIC13Q5XKP0 118 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q6P435 159 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 OR5AS1Q8N127 324 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 OR4X2Q8NGF9 303 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CCL4L1Q8NHW4 92 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 LSM10Q969L4 123 aaKnown RBP3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 NOP16Q9Y3C1 178 aaKnown RBP3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 KDM5AP29375 1690 aaKnown RBP3.54□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SCN9AQ15858 1988 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ALPK3Q96L96 1907 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TRGV5A0A0B4J1U4 118 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 C3orf85A0A1B0GTC6 90 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TCRBV3S1A0A5B6 114 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 C7orf66A4D0T2 115 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 OOSP1A8MZH6 123 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 M0R2P5 195 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 IGLV7-43P04211 117 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CIRBPQ14011 172 aaKnown RBP3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q6AWC8 147 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 OTOSQ8NHW6 89 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 GFRA4Q9GZZ7 299 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ASF1BQ9NVP2 202 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TAS2R4Q9NYW5 299 aa3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 KIF26AQ9ULI4 1882 aaPredicted RBP3.53□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CABIN1Q9Y6J0 2220 aa3.52□□□□□ -1.85
PTP4A1P1-201ENST00000420539 BAZ1AQ9NRL2 1556 aaPredicted RBP3.52□□□□□ -1.85
PTP4A1P1-201ENST00000420539 NUP214P35658 2090 aaPredicted RBP3.52□□□□□ -1.85
PTP4A1P1-201ENST00000420539 TRAV7A0A075B6U4 112 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms