RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 CD300CQ08708 224 aa13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 SPATA31B1PQ5VZV4 182 aa13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 OR5A1Q8NGJ0 315 aa13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 INTS1Q8N201 2190 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-202ENST00000418600 GAGE12BA1L429 117 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 F8WEM9 126 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 GAGE7O76087 117 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 GAGE12FP0CL80 117 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 GAGE12GP0CL81 117 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 GAGE12IP0CL82 117 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 ZFHX2Q9C0A1 2572 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 OR11H6Q8NGC7 330 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 A0A1W2PRE2 83 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 CCL20P78556 96 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 MDC1Q14676 2089 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 IGKV1D-8A0A087WSZ0 117 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 DLX4Q92988 240 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 ATOH7Q8N100 152 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 CST9LQ9H4G1 147 aa13.54□□□□□ -0.24
SYNGAP1-202ENST00000418600 AZU1P20160 251 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 PPIFP30405 207 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 APOMO95445 188 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 SEC11AP67812 179 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 IGHV7-4-1A0A0J9YVY3 117 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 GGTLC3B5MD39 225 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 BCL6BQ8N143 479 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 CITED2Q99967 270 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 A0A1W2PPI3 338 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 HBDP02042 147 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 C4orf3Q8WVX3 66 aa13.53□□□□□ -0.24
SYNGAP1-202ENST00000418600 HIGD1CA8MV81 97 aa13.52□□□□□ -0.24
SYNGAP1-202ENST00000418600 DPM2O94777 84 aa13.52□□□□□ -0.24
SYNGAP1-202ENST00000418600 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.24
SYNGAP1-202ENST00000418600 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.24
SYNGAP1-202ENST00000418600 A0A087WWC5 75 aa13.52□□□□□ -0.24
SYNGAP1-202ENST00000418600 JPT2Q9H910 190 aa13.52□□□□□ -0.24
SYNGAP1-202ENST00000418600 TRAV5A0A0B4J249 113 aa13.52□□□□□ -0.25
SYNGAP1-202ENST00000418600 SHISA3A0PJX4 238 aa13.52□□□□□ -0.25
SYNGAP1-202ENST00000418600 DMRT1Q9Y5R6 373 aa13.52□□□□□ -0.25
SYNGAP1-202ENST00000418600 SCN8AQ9UQD0 1980 aa13.52□□□□□ -0.25
SYNGAP1-202ENST00000418600 SLC17A3O00476 420 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 CCL18P55774 89 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 RNF144BQ7Z419 303 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 INSL3P51460 131 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 CHTOPQ9Y3Y2 248 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 OSTCQ9NRP0 149 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 TMEM14BQ9NUH8 114 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 EVI2AP22794 236 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 ATP5G3P48201 142 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 LINC00158P58513 81 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 RFNGQ9Y644 331 aa13.51□□□□□ -0.25
SYNGAP1-202ENST00000418600 LINC00205P59089 165 aa13.5□□□□□ -0.25
SYNGAP1-202ENST00000418600 SS18Q15532 418 aa13.5□□□□□ -0.25
SYNGAP1-202ENST00000418600 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-202ENST00000418600 SRP19P09132 144 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-202ENST00000418600 C5orf30Q96GV9 206 aa13.5□□□□□ -0.25
SYNGAP1-202ENST00000418600 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 VWC2Q2TAL6 325 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 FER1L5A0AVI2 2057 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 SPRNQ5BIV9 151 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 PGPEP1LA6NFU8 196 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 DMRTA1Q5VZB9 504 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 EXOC3-AS1Q8N2X6 119 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 MBD3L1Q8WWY6 194 aa13.49□□□□□ -0.25
SYNGAP1-202ENST00000418600 TMEM131Q92545 1883 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 GGTLC1Q9BX51 225 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 KLK9Q9UKQ9 250 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 LHBP01229 141 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 C5orf24Q7Z6I8 188 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 RASL10AQ92737 203 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 SPCS1Q9Y6A9 102 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 RNASE2P10153 161 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 ATP5L2Q7Z4Y8 100 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 OVOL2Q9BRP0 275 aa13.48□□□□□ -0.25
SYNGAP1-202ENST00000418600 A0A1B0GV72 72 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 BLCAPP62952 87 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 IGF2BP2-AS1Q96M15 143 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 SLAQ13239 276 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 ATXN8Q156A1 80 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 C8orf31Q8N9H6 132 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 MS4A6AQ9H2W1 248 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 CARHSP1Q9Y2V2 147 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 DIAPH2-AS1Q14236 149 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 TREML4Q6UXN2 200 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 TMEM238C9JI98 176 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 IFITM3Q01628 133 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 ERCC8Q13216 396 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 ZNF581Q9P0T4 197 aa13.47□□□□□ -0.25
SYNGAP1-202ENST00000418600 PAX4O43316 350 aa13.46□□□□□ -0.25
SYNGAP1-202ENST00000418600 CHCHD1Q96BP2 118 aaKnown RBP13.46□□□□□ -0.25
SYNGAP1-202ENST00000418600 ZNF561-AS1K7EIQ3 104 aa13.46□□□□□ -0.25
SYNGAP1-202ENST00000418600 NMSQ5H8A3 153 aa13.46□□□□□ -0.25
SYNGAP1-202ENST00000418600 PLEKHB2Q96CS7 222 aa13.46□□□□□ -0.25
SYNGAP1-202ENST00000418600 SPAG8Q99932 426 aaPredicted RBP13.46□□□□□ -0.25
SYNGAP1-202ENST00000418600 GAGE12JA6NER3 117 aa13.46□□□□□ -0.26
SYNGAP1-202ENST00000418600 SPART-AS1P0CW21 52 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms