RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 BORCS7Q96B45 105 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 DNAJC30Q96LL9 226 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 HSPB9Q9BQS6 159 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 COMMD5Q9GZQ3 224 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 CCL28Q9NRJ3 127 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM167BQ9NRX6 74 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM38BQ9NVV0 291 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 MMP17Q9ULZ9 603 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 SOX21Q9Y651 276 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 DOCK9Q9BZ29 2069 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-13A0A0B4J2D9 117 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGHV3-16A0A0C4DH30 117 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-6A0A0C4DH72 117 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 UBE2L5PA0A1B0GUS4 154 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SMIM27A0A1W2PRY6 76 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGLC7A0M8Q6 106 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 RPL37AP8A6NKH3 93 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 H0YJW9 148 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SLC17A3O00476 420 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 CCL25O15444 150 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 ANGPTL7O43827 346 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 CD5LO43866 347 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SS18L1O75177 396 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-39P01597 117 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-39P04432 117 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGHV4-34P06331 123 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SCTP09683 121 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SMIM17P0DL12 118 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-13P0DP09 117 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 PSG2P11465 335 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 NPPCP23582 126 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 KIR2DS2P43631 304 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 APOC4P55056 127 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 EIF4EBP1Q13541 118 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 OTPQ5XKR4 325 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 ATP5L2Q7Z4Y8 100 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 ALPK2Q86TB3 2170 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 UBALD2Q8IYN6 164 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 C1orf158Q8N1D5 194 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 DEFB125Q8N687 156 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q8N976 141 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR51H1Q8NH63 302 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 VN1R17PQ8TDU5 208 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SRSF12Q8WXF0 261 aaKnown RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 GALMQ96C23 342 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 HSD17B10Q99714 261 aaKnown RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR2H1Q9GZK4 316 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 HES4Q9HCC6 221 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 ESM1Q9NQ30 184 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 DEPPQ9NTK1 212 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 RBM7Q9Y580 266 aaKnown RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 RFNGQ9Y644 331 aa2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 CHCHD2Q9Y6H1 151 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 PRRC2BQ5JSZ5 2229 aaKnown RBP2.72□□□□□ -1.97
HMGB3P23-201ENST00000414981 SHANK1Q9Y566 2161 aa2.71□□□□□ -1.97
HMGB3P23-201ENST00000414981 PHF3Q92576 2039 aaKnown RBP2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 SRCAPQ6ZRS2 3230 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 THADAQ6YHU6 1953 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 TNRC6AQ8NDV7 1962 aaKnown RBP2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 EXPH5Q8NEV8 1989 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 IGHV1OR21-1A0A087WYE8 117 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 A0A0G2JRQ6 117 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 A0A1W2PRS3 328 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 IZUMO1RA6ND01 250 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 C17orf51A8MQB3 221 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 J3QT63 122 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 NUPR1O60356 82 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR9G9P0C7N8 305 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 CCL5P13501 91 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNF32P17041 273 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 CRYBB3P26998 211 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 GLRXP35754 106 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 TAS2R45P59539 299 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 KRTDAPP60985 99 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 SEC11AP67812 179 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 MMDQ15546 238 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 OCIAD2Q56VL3 154 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 SPATA31B1PQ5VZV4 182 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 TMEM136Q6ZRR5 245 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 GTF2H5Q6ZYL4 71 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 NEGR1Q7Z3B1 354 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 SPATA12Q7Z6I5 190 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 DRAM1Q8N682 238 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 Q8N7P7 452 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNF439Q8NDP4 499 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR8B3Q8NGG8 313 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNRF2Q8NHG8 242 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 CHCHD1Q96BP2 118 aaKnown RBP2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR8B2Q96RD0 313 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 CDX2Q99626 313 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 PLA2G2FQ9BZM2 168 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 SLC25A22Q9H936 323 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 NPVFQ9HCQ7 196 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 PKIGQ9Y2B9 76 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 V9GYV3 84 aa2.71□□□□□ -1.98
HMGB3P23-201ENST00000414981 NCOA6Q14686 2063 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TRBV20OR9-2A0A075B6H5 130 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 LOC100131303A0A0U1RQF7 123 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms