RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CXCL3P19876 107 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 GATA2P23769 480 aaPredicted RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 EWSR1Q01844 656 aaKnown RBP eCLIP4.65□□□□□ -1.67
USP54-202ENST00000413442 ARL16Q0P5N6 197 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 OPCMLQ14982 345 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 ZNF124Q15973 351 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 OR5C1Q8NGR4 320 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 SCGB1C1Q8TD33 95 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 TMEM37Q8WXS4 190 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 IGF2BP2-AS1Q96M15 143 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 LINC00477Q96M19 166 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 ODF3Q96PU9 254 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 MRPL32Q9BYC8 188 aaKnown RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 ZNF331Q9NQX6 463 aaPredicted RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 PPP1R14DQ9NXH3 145 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 AGRNO00468 2067 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 MRPS12O15235 138 aaKnown RBP4.64□□□□□ -1.67
USP54-202ENST00000413442 HBE1P02100 147 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 FGF7P21781 194 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 RPL12P30050 165 aaKnown RBP4.64□□□□□ -1.67
USP54-202ENST00000413442 H2BFSP57053 126 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 TAS2R45P59539 299 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 SERF2P84101 59 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 NHLH2Q02577 135 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 ZNF266Q14584 549 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 FAM78BQ5VT40 261 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 ZNF493Q6ZR52 646 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 Q8NAQ8 132 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 OR4B1Q8NGF8 309 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 OR8A1Q8NGG7 326 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 OR10J6PQ8NGY7 276 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 C2CD4CQ8TF44 421 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 PHLDA1Q8WV24 401 aaPredicted RBP4.64□□□□□ -1.67
USP54-202ENST00000413442 SAT2Q96F10 170 aaPredicted RBP4.64□□□□□ -1.67
USP54-202ENST00000413442 ATP5SQ99766 215 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 RNF126Q9BV68 326 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 SCRT1Q9BWW7 348 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 NPCDR1Q9BY65 106 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 WDR61Q9GZS3 305 aaKnown RBP4.64□□□□□ -1.67
USP54-202ENST00000413442 MED28Q9H204 178 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 AAMDCQ9H7C9 122 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 RETNQ9HD89 108 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 RFNGQ9Y644 331 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 X6R8D5 127 aa4.64□□□□□ -1.67
USP54-202ENST00000413442 TRAV10A0A0B4J240 114 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 IGSF23A1L1A6 192 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 CCNKO75909 580 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 INSP01308 110 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 MBP02144 154 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 SLC25A5P05141 298 aaKnown RBP4.63□□□□□ -1.67
USP54-202ENST00000413442 IGLC2P0DOY2 106 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 CDKN1BP46527 198 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 RRN3P1Q2M238 152 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 RGS21Q2M5E4 152 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 FAM74A1Q5RGS3 127 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 LGALS9CQ6DKI2 356 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 ZFAND6Q6FIF0 208 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 ZNF738Q8NE65 137 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 RPUSD4Q96CM3 377 aaKnown RBP4.63□□□□□ -1.67
USP54-202ENST00000413442 UHRF2Q96PU4 802 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 XCL2Q9UBD3 114 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 HSPB11Q9Y547 144 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 TIMM9Q9Y5J7 89 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 STAB2Q8WWQ8 2551 aa4.63□□□□□ -1.67
USP54-202ENST00000413442 TRBV19A0A075B6N1 114 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 TRAV8-2A0A0B4J237 113 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 IGHV4-28A0A0C4DH34 117 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 UBE2L5PA0A1B0GUS4 154 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 RBAKDNA6NC62 111 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 LYRM9A8MSI8 78 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 H0YIZ8 118 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 BOLA2-SMG1P6H3BVE0 249 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 SIX6O95475 246 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 GIPP09681 153 aaPredicted RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 NBEAP1P0C6P0 100 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 RBMY1A1P0DJD3 496 aaKnown RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 RBMY1CP0DJD4 496 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 C4BPBP20851 252 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 CNN1P51911 297 aaKnown RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 TAS2R60P59551 318 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 RHOBP62745 196 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 RBMY1FQ15415 496 aaKnown RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 ACOT6Q3I5F7 207 aaPredicted RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 AMTNQ6UX39 209 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 PQLC2Q6ZP29 291 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 INO80EQ8NBZ0 244 aaPredicted RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 OR11H7Q8NGC8 314 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 RXFP4Q8TDU9 374 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 C17orf77Q96MU5 243 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 AQP10Q96PS8 301 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 PSMG3Q9BT73 122 aaPredicted RBP4.62□□□□□ -1.67
USP54-202ENST00000413442 TMEM208Q9BTX3 173 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 OR51M1Q9H341 326 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 OR5AC2Q9NZP5 309 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 LENEPQ9Y5L5 61 aa4.62□□□□□ -1.67
USP54-202ENST00000413442 A0A1W2PPV4 95 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 FBLL1A6NHQ2 334 aaKnown RBP4.61□□□□□ -1.67
USP54-202ENST00000413442 H7BYZ3 331 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms