RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SDK2Q58EX2 2172 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 A0A1B0GW64 132 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 TOR1AO14656 332 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 SYNGR2O43760 224 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF737O75373 536 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 CST7O76096 145 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 LHBP01229 141 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGKV1-5P01602 117 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGLV2-8P01709 118 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 HBZP02008 142 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 PRH1P02810 166 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 TFF1P04155 84 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 SFTA3P0C7M3 94 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 GZMHP20718 246 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 ATP6V0CP27449 155 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 GLRXP35754 106 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 GABRA2P47869 451 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 SULT1A1P50225 295 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF83P51522 516 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 TAS2R30P59541 319 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 AESQ08117 197 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 EIF4EBP1Q13541 118 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 PEA15Q15121 130 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 GUK1Q16774 197 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 SMIM21Q3B7S5 101 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 FAM222AQ5U5X8 452 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 FAM231DQ6ZW35 169 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 FAM19A1Q7Z5A9 133 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 LRP11Q86VZ4 500 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 RPRMLQ8N4K4 120 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 TCTEX1D1Q8N7M0 179 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 LFNGQ8NES3 379 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR5C1Q8NGR4 320 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 RNASE11Q8TAA1 199 aaKnown RBP2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 FAM57AQ8TBR7 257 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 MUCL1Q96DR8 90 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 GNPNAT1Q96EK6 184 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 LINC00477Q96M19 166 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 SH3BGRL3Q9H299 93 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 SMDT1Q9H4I9 107 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 COA4Q9NYJ1 87 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 PSENENQ9NZ42 101 aa2.91□□□□□ -1.94
HMGB3P18-201ENST00000406327 PI4KAP42356 2102 aa2.9□□□□□ -1.94
HMGB3P18-201ENST00000406327 SPEGQ15772 3267 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGLV3-9A0A075B6K5 115 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGKV1D-17A0A075B6S4 117 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 TRAV1-1A0A0B4J248 108 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 MKRN2OSH3BPM6 223 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 C15orf65H3BRN8 121 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 KRASP01116 189 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 IFNA5P01569 189 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CGB3P0DN86 165 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CGB7P0DN87 165 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 PPP1CCP36873 323 aaKnown RBP2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 DYNLT3P51808 116 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 KLF3P57682 345 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 RPL30P62888 115 aaKnown RBP2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CCL20P78556 96 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF616Q08AN1 781 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CATR1Q13166 79 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 MORN2Q502X0 79 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 UNQ9165/PRO28630Q6UXU0 137 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 DPPA3Q6W0C5 159 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 STX12Q86Y82 276 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 FAM213BQ8TBF2 198 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 SCGB1C1Q8TD33 95 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 C22orf15Q8WYQ4 148 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 C18orf15Q96N68 181 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 PBDC1Q9BVG4 233 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 PARD6GQ9BYG4 376 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 EIF5A2Q9GZV4 153 aaKnown RBP2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 SLC35B3Q9H1N7 401 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR2D2Q9H210 308 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 INSIG2Q9Y5U4 225 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CACNA1CQ13936 2221 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 GPR179Q6PRD1 2367 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 CFAP54Q96N23 3096 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 VCANP13611 3396 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 KMT2EQ8IZD2 1858 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 MED12Q93074 2177 aa2.9□□□□□ -1.95
HMGB3P18-201ENST00000406327 NCKAP5O14513 1909 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 NACAE9PAV3 2078 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 FRYLO94915 3013 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGHV3OR15-7A0A075B7D8 119 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGHV3-43A0A0B4J1X8 118 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 TRAV40A0A0B4J280 105 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 ODAMA1E959 279 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 RBFOX3A6NFN3 312 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 COLCA2A8K830 154 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 C17orf98A8MV24 154 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 DEFB108AA8MXU0 73 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 ATP6V1G2-DDX39BF2Z307 99 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 ITGB1BP1O14713 200 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR7C2O60412 319 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 YPEL1O60688 119 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 S1PR2O95136 353 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGHV1-46P01743 117 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms