RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RASL11BQ9BPW5 248 aa15.68■□□□□ 0.1
CCDC47-202ENST00000403162 TP73-AS1Q9UF72 201 aa15.68■□□□□ 0.1
CCDC47-202ENST00000403162 RNF24Q9Y225 148 aa15.68■□□□□ 0.1
CCDC47-202ENST00000403162 INSIG2Q9Y5U4 225 aa15.68■□□□□ 0.1
CCDC47-202ENST00000403162 RNASE8Q8TDE3 154 aaKnown RBP15.68■□□□□ 0.1
CCDC47-202ENST00000403162 LOC105371242A0A075B767 164 aa15.67■□□□□ 0.1
CCDC47-202ENST00000403162 Q71RC1 249 aaPredicted RBP15.67■□□□□ 0.1
CCDC47-202ENST00000403162 NEU4Q8WWR8 484 aaPredicted RBP15.67■□□□□ 0.1
CCDC47-202ENST00000403162 ZC2HC1AQ96GY0 325 aa15.67■□□□□ 0.1
CCDC47-202ENST00000403162 TMUB1Q9BVT8 246 aa15.67■□□□□ 0.1
CCDC47-202ENST00000403162 TRBV19A0A075B6N1 114 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 A0A1B0GW15 77 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 E7EQL1 145 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 ZNF138P52744 262 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 RIGQ13278 110 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 BVES-AS1Q5T3Y7 98 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 LINC01545Q5VT33 79 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 SRSF12Q8WXF0 261 aaKnown RBP15.66■□□□□ 0.1
CCDC47-202ENST00000403162 DYNLRB1Q9NP97 96 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 MALRD1Q5VYJ5 2156 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 BUB1B-PAK6H3BSN5 160 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 IGKV1-17P01599 117 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 SRSF1Q07955 248 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCDC47-202ENST00000403162 SRSF8Q9BRL6 282 aaKnown RBP15.66■□□□□ 0.1
CCDC47-202ENST00000403162 SHANK2-AS3Q9BTD1 123 aa15.66■□□□□ 0.1
CCDC47-202ENST00000403162 TRAV30A0A087WSZ9 112 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 NUDT3O95989 172 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 ARMS2P0C7Q2 107 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 RBX1P62877 108 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 C12orf54Q6X4T0 127 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 BPIFA4PQ86YQ2 179 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 LYPD1Q8N2G4 141 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 TAX1BP3O14907 124 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 RBP4P02753 201 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 PCP4P48539 62 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 FBXL15Q9H469 300 aa15.65■□□□□ 0.1
CCDC47-202ENST00000403162 MYO18BQ8IUG5 2567 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 H3BRN7 92 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 TOX4O94842 621 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 RHOGP84095 191 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 Q6AWC8 147 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 SIGLEC15Q6ZMC9 328 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 DEFB125Q8N687 156 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 OR4C5Q8NGB2 326 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 RNF5Q99942 180 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 AP5S1Q9NUS5 200 aa15.64■□□□□ 0.09
CCDC47-202ENST00000403162 K7EQM0 130 aa15.63■□□□□ 0.09
CCDC47-202ENST00000403162 FLNCQ14315 2725 aa15.63■□□□□ 0.09
CCDC47-202ENST00000403162 DLX1P56177 255 aa15.63■□□□□ 0.09
CCDC47-202ENST00000403162 ZNF672Q499Z4 452 aaPredicted RBP15.63■□□□□ 0.09
CCDC47-202ENST00000403162 PSG8Q9UQ74 426 aa15.63■□□□□ 0.09
CCDC47-202ENST00000403162 CSN3P07498 182 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 PLA2G2AP14555 144 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 APOBEC3AP31941 199 aaPredicted RBP15.62■□□□□ 0.09
CCDC47-202ENST00000403162 VAMP3Q15836 100 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 PSG3Q16557 428 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 ROS1P08922 2347 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 K7EIM0 57 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 HIST1H1AQ02539 215 aaPredicted RBP15.62■□□□□ 0.09
CCDC47-202ENST00000403162 C17orf77Q96MU5 243 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 ZNF747Q9BV97 191 aa15.62■□□□□ 0.09
CCDC47-202ENST00000403162 UBR5O95071 2799 aaPredicted RBP15.61■□□□□ 0.09
CCDC47-202ENST00000403162 RPS20P60866 119 aaKnown RBP15.61■□□□□ 0.09
CCDC47-202ENST00000403162 RPEQ96AT9 228 aa15.61■□□□□ 0.09
CCDC47-202ENST00000403162 DOPEY1Q5JWR5 2465 aa15.61■□□□□ 0.09
CCDC47-202ENST00000403162 MUC21A0A0G2JKD1 596 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 MUC21A0A140T8X8 626 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 MRPS12O15235 138 aaKnown RBP15.6■□□□□ 0.09
CCDC47-202ENST00000403162 CSN1S1P47710 185 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 MUC21Q5SSG8 566 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 ZNF493Q6ZR52 646 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 MCRIP2Q9BUT9 160 aaKnown RBP15.6■□□□□ 0.09
CCDC47-202ENST00000403162 USP9XQ93008 2570 aaPredicted RBP15.6■□□□□ 0.09
CCDC47-202ENST00000403162 CRIP1P50238 77 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 OR10AG1Q8NH19 301 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 PMCHL2Q9BQD1 86 aa15.6■□□□□ 0.09
CCDC47-202ENST00000403162 H0Y8G0 127 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 J3QKU1 62 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 COX8AP10176 69 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 CDKN1BP46527 198 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 PRB3Q04118 309 aaPredicted RBP15.59■□□□□ 0.09
CCDC47-202ENST00000403162 PLGLAQ15195 96 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 C21orf62-AS1Q17RA5 79 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 FA2HQ7L5A8 372 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 ZNF491Q8N8L2 437 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 LY6LH3BQJ8 138 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 RNF125Q96EQ8 232 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 ZNF414Q96IQ9 312 aa15.59■□□□□ 0.09
CCDC47-202ENST00000403162 ARF6P62330 175 aa15.58■□□□□ 0.08
CCDC47-202ENST00000403162 PRSS3P2Q8NHM4 247 aa15.58■□□□□ 0.08
CCDC47-202ENST00000403162 PKDREJQ9NTG1 2253 aa15.58■□□□□ 0.08
CCDC47-202ENST00000403162 B9A039 149 aa15.58■□□□□ 0.08
CCDC47-202ENST00000403162 CD5LO43866 347 aa15.58■□□□□ 0.08
CCDC47-202ENST00000403162 WI2-2373I1.2A0A1W2PRP0 233 aa15.57■□□□□ 0.08
CCDC47-202ENST00000403162 A1L4Q6 167 aa15.57■□□□□ 0.08
CCDC47-202ENST00000403162 CNIH1O95406 144 aa15.57■□□□□ 0.08
CCDC47-202ENST00000403162 COX7A1P24310 79 aa15.57■□□□□ 0.08
CCDC47-202ENST00000403162 DPF1Q92782 380 aa15.57■□□□□ 0.08
CCDC47-202ENST00000403162 GPR183P32249 361 aa15.56■□□□□ 0.08
CCDC47-202ENST00000403162 PDE6HQ13956 83 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms