RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZNF785A8K8V0 405 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 H3BQ15 152 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 CCL24O00175 119 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 CHEK1O14757 476 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 ATP5G3P48201 142 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 SYNJ2BPP57105 145 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 RANP62826 216 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 PNRC1Q12796 327 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 CMTM2Q8TAZ6 248 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 Q9H3A6 140 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 SIGLEC8Q9NYZ4 499 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 GGTLC3B5MD39 225 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 C9JQL5 133 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 K7EQM0 130 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 CSN1S1P47710 185 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 C8orf86Q6ZUL3 223 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 OR9G4Q8NGQ1 327 aa14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 MRPL53Q96EL3 112 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-204ENST00000397404 IGHV3OR16-8A0A075B7F1 116 aa14.49□□□□□ -0.09
TSPAN4-204ENST00000397404 TM4SF20Q53R12 229 aa14.49□□□□□ -0.09
TSPAN4-204ENST00000397404 LINC00052Q96N35 136 aa14.49□□□□□ -0.09
TSPAN4-204ENST00000397404 SETD2Q9BYW2 2564 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 PGPA6NDG6 321 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 C2orf70A6NJV1 201 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 ZNF207O43670 478 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 NDUFB4O95168 129 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 TAS2R60P59551 318 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 FAM90A2PQ658T7 463 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 SMIM12Q96EX1 92 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 RAX2Q96IS3 184 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 ATG101Q9BSB4 218 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 EPDR1Q9UM22 224 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 LY96Q9Y6Y9 160 aa14.48□□□□□ -0.09
TSPAN4-204ENST00000397404 SNAPINO95295 136 aa14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 APOHP02749 345 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 CBLN1P23435 193 aa14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 SMIM7Q9BQ49 75 aa14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 NRN1Q9NPD7 142 aa14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 ZNF331Q9NQX6 463 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 MLXQ9UH92 298 aa14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 SMAD5-AS1Q9Y6J3 95 aa14.47□□□□□ -0.09
TSPAN4-204ENST00000397404 ZNF727A8MUV8 499 aa14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 C9JCJ5 164 aa14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 SLC25A5P05141 298 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 CNN1P51911 297 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 C18orf65Q6ZTR6 163 aa14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 PARLQ9H300 379 aa14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 NAT8Q9UHE5 227 aa14.46□□□□□ -0.09
TSPAN4-204ENST00000397404 TRAV2A0A0B4J234 112 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 B4DEV8 164 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 PEX7O00628 323 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 APOC3P02656 99 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 ADCYAP1P18509 176 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 SLURP1P55000 103 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 PAFAH1B2P68402 229 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 DEFB136Q30KP8 78 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 C2CD4CQ8TF44 421 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 JMJD1CQ15652 2540 aa14.45□□□□□ -0.1
TSPAN4-204ENST00000397404 ISLRO14498 428 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 FOLR2P14207 255 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 ID1P41134 155 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 AKR1C3P42330 323 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 CEBPGP53567 150 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 TMEM241Q24JQ0 296 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 AWAT1Q58HT5 328 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 TVP23CQ96ET8 276 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 FMC1Q96HJ9 113 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 CITED1Q99966 193 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 KLF12Q9Y4X4 402 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 TRBV6-1A0A0K0K1D8 114 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 SCO2A0A1W2PP80 73 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 TCRAP04437 139 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 TCF24Q7RTU0 167 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 C11orf44Q8N8P7 122 aa14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 DLX4Q92988 240 aaPredicted RBP14.44□□□□□ -0.1
TSPAN4-204ENST00000397404 TRAV25A0A0B4J276 109 aa14.43□□□□□ -0.1
TSPAN4-204ENST00000397404 RBAKDNA6NC62 111 aa14.43□□□□□ -0.1
TSPAN4-204ENST00000397404 ADARB2-AS1A8MUL3 147 aa14.43□□□□□ -0.1
TSPAN4-204ENST00000397404 OVOL1O14753 267 aa14.43□□□□□ -0.1
TSPAN4-204ENST00000397404 C16orf92Q96LL3 132 aa14.43□□□□□ -0.1
TSPAN4-204ENST00000397404 IGHV3OR16-13A0A075B7E8 117 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 IGHV3-49A0A0A0MS15 119 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 IGHV3-74A0A0B4J1X5 117 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 IGHV3-66A0A0C4DH42 116 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 A0A1W2PRX2 142 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 SLC17A3O00476 420 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 RPL35P42766 123 aaKnown RBP14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 UBE2G1P62253 170 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 RHEBQ15382 184 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 TMEM183BQ1AE95 376 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 TMEM75Q8N9X5 138 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 BIN3Q9NQY0 253 aa14.42□□□□□ -0.1
TSPAN4-204ENST00000397404 RPL11P62913 178 aaKnown RBP14.41□□□□□ -0.1
TSPAN4-204ENST00000397404 OR2K2Q8NGT1 345 aa14.41□□□□□ -0.1
TSPAN4-204ENST00000397404 C17orf77Q96MU5 243 aa14.41□□□□□ -0.1
TSPAN4-204ENST00000397404 SDF2L1Q9HCN8 221 aa14.41□□□□□ -0.1
TSPAN4-204ENST00000397404 DIRC3C9JPN6 131 aa14.4□□□□□ -0.1
TSPAN4-204ENST00000397404 CSN3P07498 182 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms