RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 UBE2G2P60604 165 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 PSG9Q00887 426 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 NSUN5P1Q3KNT7 163 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 CITED1Q99966 193 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 TMEM213A2RRL7 107 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 C11orf94C9JXX5 98 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 CHEK1O14757 476 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 ZNF253O75346 499 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 ATP5G3P48201 142 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 CEBPGP53567 150 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 KRTAP24-1Q3LI83 254 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 BLNKQ8WV28 456 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
VAPB-202ENST00000395802 TRBV19A0A075B6N1 114 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 A0A087X0K7 114 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 C2orf70A6NJV1 201 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 FAM74A7A6NL05 159 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 MRPS12O15235 138 aaKnown RBP10.42□□□□□ -0.74
VAPB-202ENST00000395802 CBLN1P23435 193 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 PRIMA1Q86XR5 153 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 GLMPQ8WWB7 406 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
VAPB-202ENST00000395802 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 YTHDF2Q9Y5A9 579 aaKnown RBP10.42□□□□□ -0.74
VAPB-202ENST00000395802 ATRQ13535 2644 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 IGHV3OR16-13A0A075B7E8 117 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 IGHV3-74A0A0B4J1X5 117 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 IGHV3-66A0A0C4DH42 116 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 F6UZH7 168 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 APOHP02749 345 aaPredicted RBP10.42□□□□□ -0.74
VAPB-202ENST00000395802 PF4P02776 101 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 DUX3Q96PT4 197 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 SLC50A1Q9BRV3 221 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 ZNF586Q9NXT0 402 aa10.42□□□□□ -0.74
VAPB-202ENST00000395802 ADARB2-AS1A8MUL3 147 aa10.41□□□□□ -0.74
VAPB-202ENST00000395802 OVOL1O14753 267 aa10.41□□□□□ -0.74
VAPB-202ENST00000395802 FOLR2P14207 255 aa10.41□□□□□ -0.74
VAPB-202ENST00000395802 KRTAP10-3P60369 221 aa10.41□□□□□ -0.74
VAPB-202ENST00000395802 RANP62826 216 aaKnown RBP10.41□□□□□ -0.74
VAPB-202ENST00000395802 RPL11P62913 178 aaKnown RBP10.41□□□□□ -0.74
VAPB-202ENST00000395802 H3BQ15 152 aa10.4□□□□□ -0.74
VAPB-202ENST00000395802 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
VAPB-202ENST00000395802 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.74
VAPB-202ENST00000395802 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
VAPB-202ENST00000395802 OTORQ9NRC9 128 aa10.4□□□□□ -0.74
VAPB-202ENST00000395802 SIGLEC8Q9NYZ4 499 aa10.4□□□□□ -0.74
VAPB-202ENST00000395802 SUMO1P63165 101 aaKnown RBP10.4□□□□□ -0.75
VAPB-202ENST00000395802 C12orf54Q6X4T0 127 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 C3orf56Q8N813 242 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 HIST1H2BAQ96A08 127 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 NIPSNAP3BQ9BS92 247 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 ZNF747Q9BV97 191 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 Q9H3A6 140 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 NRN1Q9NPD7 142 aa10.4□□□□□ -0.75
VAPB-202ENST00000395802 CSN1S1P47710 185 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 BTN1A1Q13410 526 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 TCF24Q7RTU0 167 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 C5orf17Q8NAS9 161 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 DYNLRB2Q8TF09 96 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 PARLQ9H300 379 aa10.39□□□□□ -0.75
VAPB-202ENST00000395802 PGPA6NDG6 321 aa10.38□□□□□ -0.75
VAPB-202ENST00000395802 SHISA2Q6UWI4 295 aa10.38□□□□□ -0.75
VAPB-202ENST00000395802 PRELID1Q9Y255 219 aa10.38□□□□□ -0.75
VAPB-202ENST00000395802 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
VAPB-202ENST00000395802 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 GGTLC3B5MD39 225 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 K7EQM0 130 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 M0R036 132 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 RBPMS2Q6ZRY4 209 aaKnown RBP10.37□□□□□ -0.75
VAPB-202ENST00000395802 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 C16orf92Q96LL3 132 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 SMIM7Q9BQ49 75 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 ZNF331Q9NQX6 463 aaPredicted RBP10.37□□□□□ -0.75
VAPB-202ENST00000395802 MLXQ9UH92 298 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
VAPB-202ENST00000395802 NDUFB4O95168 129 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 SLC25A5P05141 298 aaKnown RBP10.37□□□□□ -0.75
VAPB-202ENST00000395802 CSN3P07498 182 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 SNRPCP09234 159 aaKnown RBP10.37□□□□□ -0.75
VAPB-202ENST00000395802 ID1P41134 155 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 RHEBQ15382 184 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 HIST2H2BDQ6DRA6 164 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 C11orf52Q96A22 123 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 DERL1Q9BUN8 251 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 SDF2L1Q9HCN8 221 aa10.37□□□□□ -0.75
VAPB-202ENST00000395802 TRAV25A0A0B4J276 109 aa10.36□□□□□ -0.75
VAPB-202ENST00000395802 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
VAPB-202ENST00000395802 H3BTX0 84 aa10.36□□□□□ -0.75
VAPB-202ENST00000395802 ISLRO14498 428 aa10.36□□□□□ -0.75
VAPB-202ENST00000395802 PNRC1Q12796 327 aaPredicted RBP10.36□□□□□ -0.75
VAPB-202ENST00000395802 ZNF674Q2M3X9 581 aa10.36□□□□□ -0.75
VAPB-202ENST00000395802 EPDR1Q9UM22 224 aa10.36□□□□□ -0.75
VAPB-202ENST00000395802 S100A9P06702 114 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms