RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 GTSCR1Q86UQ5 136 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 HAPLN4Q86UW8 402 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 SHANK2-AS3Q9BTD1 123 aa10.45□□□□□ -0.74
PTPRN2-202ENST00000389416 IZUMO1RA6ND01 250 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 Q6AWC8 147 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 OR10AG1Q8NH19 301 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 J3QR89 54 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 NMUP48645 174 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 LINC01551Q86U37 167 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 C18orf15Q96N68 181 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 TNFRSF18Q9Y5U5 241 aa10.44□□□□□ -0.74
PTPRN2-202ENST00000389416 FXYD7P58549 80 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 PRR31Q5SQ13 230 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 C8orf31Q8N9H6 132 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 BRCA2P51587 3418 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 GTF2H5Q6ZYL4 71 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 SORL1Q92673 2214 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 LOC105371267A0A1B0GV96 52 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 ZNF138P52744 262 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 TMEM95Q3KNT9 176 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 H3BVH4 76 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 LEPP41159 167 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 BLCAPP62952 87 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 MST1LQ2TV78 715 aa10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 PARD6GQ9BYG4 376 aaPredicted RBP10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
PTPRN2-202ENST00000389416 IL15RAQ13261 267 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 ZNF256Q9Y2P7 627 aaPredicted RBP10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 IFITM10A6NMD0 228 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 LINC00469Q8N7U9 141 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 RITA1Q96K30 269 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 IGLC7A0M8Q6 106 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 H7C1H1 209 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 RPL35AP18077 110 aaKnown RBP10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 APOHP02749 345 aaPredicted RBP10.42□□□□□ -0.74
PTPRN2-202ENST00000389416 SRSF9Q13242 221 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■■■□ 23.3
PTPRN2-202ENST00000389416 NCKAP5O14513 1909 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 ZNF25P17030 456 aaPredicted RBP10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 DEFB131AP59861 70 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 SMAGPQ0VAQ4 97 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 ORMDL3Q8N138 153 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 ZNF843Q8N446 348 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 OR1N2Q8NGR9 330 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 NRN1Q9NPD7 142 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 ARHGAP32A7KAX9 2087 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 OR11H1Q8NG94 326 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 SOX21Q9Y651 276 aaPredicted RBP10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 VPREB3Q9UKI3 123 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 POLQO75417 2590 aa10.41□□□□□ -0.74
PTPRN2-202ENST00000389416 IGLC1P0CG04 106 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 PKIAP61925 76 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 C19orf54Q5BKX5 351 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 ATOH7Q8N100 152 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 Q8N7P7 452 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 MTORP42345 2549 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 OR11H12B2RN74 326 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 ZNF324O75467 553 aaPredicted RBP10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 FAM19A2Q8N3H0 131 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 TSKUQ8WUA8 353 aa10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 CDX1P47902 265 aaPredicted RBP10.4□□□□□ -0.74
PTPRN2-202ENST00000389416 IGLV1-47P01700 117 aa10.4□□□□□ -0.75
PTPRN2-202ENST00000389416 SCGB1C2P0DMR2 95 aa10.4□□□□□ -0.75
PTPRN2-202ENST00000389416 FN1P02751 2386 aaKnown RBP10.4□□□□□ -0.75
PTPRN2-202ENST00000389416 C9JQL5 133 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 ERCC8Q13216 396 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 LBHQ53QV2 105 aaPredicted RBP10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 PSG3Q16557 428 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 LYPD1Q8N2G4 141 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 FOLR2P14207 255 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 NUP210LQ5VU65 1888 aa10.39□□□□□ -0.75
PTPRN2-202ENST00000389416 TCTEX1D4Q5JR98 221 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 IGHV7-81A0A0B4J1V7 117 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 A0A1B0GW15 77 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 A0A1B0GW64 132 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 LINC01619G3V211 115 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 TRAV9-1A0A075B6T8 112 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 PCP4P48539 62 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 CDSNQ15517 529 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
PTPRN2-202ENST00000389416 C7orf71A4D174 169 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 CRIP3Q6Q6R5 217 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 FAM90A2PQ658T7 463 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 C5orf30Q96GV9 206 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 LMO4P61968 165 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms