RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 IGKV1-39P01597 117 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 IGKV1D-39P04432 117 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 SRP19P09132 144 aaKnown RBP13.08□□□□□ -0.32
KCNC1-202ENST00000379472 SAA4P35542 130 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 TM2D1Q9BX74 207 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.32
KCNC1-202ENST00000379472 CD160O95971 181 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 SPINK8P0C7L1 97 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 OVOL3O00110 214 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 Q0VFX4 171 aa13.08□□□□□ -0.32
KCNC1-202ENST00000379472 MPV17L2Q567V2 206 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 MORN5Q5VZ52 161 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 IL17RELQ6ZVW7 336 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 M0R1W7 72 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 OCC1Q8TAD7 63 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 PLSCR4Q9NRQ2 329 aa13.07□□□□□ -0.32
KCNC1-202ENST00000379472 NPDC1Q9NQX5 325 aaPredicted RBP13.07□□□□□ -0.32
KCNC1-202ENST00000379472 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 C5orf64Q2M2E5 130 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 TMEM178BH3BS89 294 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 MSMBP08118 114 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 FOXF2Q12947 444 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 RNASE2P10153 161 aaKnown RBP13.06□□□□□ -0.32
KCNC1-202ENST00000379472 C10orf55Q5SWW7 151 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 CCL18P55774 89 aa13.06□□□□□ -0.32
KCNC1-202ENST00000379472 TGFBR3LH3BV60 316 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 A0A087X0K7 114 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 I3L3M4 83 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 RHODO00212 210 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 SLC25A48Q6ZT89 311 aaKnown RBP13.05□□□□□ -0.32
KCNC1-202ENST00000379472 NEUROG3Q9Y4Z2 214 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 RALGAPA2Q2PPJ7 1873 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 A0A1B0GWJ7 208 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 BUB1B-PAK6H3BSN5 160 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 LMO1P25800 156 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 FBLIM1Q8WUP2 373 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 XCL1P47992 114 aa13.05□□□□□ -0.32
KCNC1-202ENST00000379472 NABP1Q96AH0 204 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 C1orf43Q9BWL3 253 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 ZNF837Q96EG3 531 aaPredicted RBP13.04□□□□□ -0.32
KCNC1-202ENST00000379472 Q6ZQT7 251 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 LY75O60449 1722 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 hDV102S1A0JD36 115 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 LY6HO94772 140 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 FANCD2OSQ96PS1 177 aa13.04□□□□□ -0.32
KCNC1-202ENST00000379472 A0A0G2JNJ9 132 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 Q9UFV3 132 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 MRPS18CQ9Y3D5 142 aaKnown RBP13.03□□□□□ -0.32
KCNC1-202ENST00000379472 GATA3P23771 443 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 FUSP35637 526 aaKnown RBP eCLIP13.03□□□□□ -0.32
KCNC1-202ENST00000379472 C15orf53Q8NAA6 179 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 TIMP3P35625 211 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 TP53TG1Q9Y2A0 90 aa13.03□□□□□ -0.32
KCNC1-202ENST00000379472 RPRMLQ8N4K4 120 aa13.02□□□□□ -0.32
KCNC1-202ENST00000379472 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 TMEM242Q9NWH2 141 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 RFNGQ9Y644 331 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 A0A087WWC5 75 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 A0A0A6YYD4 124 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 NEGR1Q7Z3B1 354 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 MED12Q93074 2177 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 IGKV1D-12P01611 117 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 TRGV9Q99603 122 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 C1QCP02747 245 aa13.02□□□□□ -0.33
KCNC1-202ENST00000379472 CR1LQ2VPA4 569 aa13.01□□□□□ -0.33
KCNC1-202ENST00000379472 TRBV6-7A0A0A0MS04 114 aa13.01□□□□□ -0.33
KCNC1-202ENST00000379472 ANKRD39Q53RE8 183 aa13.01□□□□□ -0.33
KCNC1-202ENST00000379472 NYNRINQ9P2P1 1898 aaKnown RBP13.01□□□□□ -0.33
KCNC1-202ENST00000379472 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
KCNC1-202ENST00000379472 RTBDNQ9BSG5 229 aaPredicted RBP13.01□□□□□ -0.33
KCNC1-202ENST00000379472 VSIRQ9H7M9 311 aa13.01□□□□□ -0.33
KCNC1-202ENST00000379472 WBP1Q96G27 269 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 TRAV13-2A0A0B4J235 113 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 RS1O15537 224 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 CFHR2P36980 270 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 C18orf12Q96KH6 178 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 KLK5Q9Y337 293 aaPredicted RBP13□□□□□ -0.33
KCNC1-202ENST00000379472 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 CASC2Q6XLA1 102 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 GPHB5Q86YW7 130 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 ADAMTSL3P82987 1691 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 IL18BPO95998 194 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 SHISA9B4DS77 424 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 PIN1P1O15428 100 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 SLAQ13239 276 aa13□□□□□ -0.33
KCNC1-202ENST00000379472 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
KCNC1-202ENST00000379472 IGKV1D-43A0A0B4J1Z2 117 aa12.99□□□□□ -0.33
KCNC1-202ENST00000379472 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
KCNC1-202ENST00000379472 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
KCNC1-202ENST00000379472 IGKV1D-13A0A0B4J2D9 117 aa12.99□□□□□ -0.33
KCNC1-202ENST00000379472 IGKV1-13P0DP09 117 aa12.99□□□□□ -0.33
KCNC1-202ENST00000379472 KIR3DS1Q14943 382 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms