RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 BDP1A6H8Y1 2624 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 DSCAML1Q8TD84 2053 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 TRAV8-4A0A0B4J246 113 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 E9PLD3 99 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 SAA2P0DJI9 122 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-202ENST00000379237 SSBP2P81877 361 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-202ENST00000379237 ABHD17AQ96GS6 310 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 RASL11BQ9BPW5 248 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 TANC2Q9HCD6 1990 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF815PA8K554 130 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 UPK2O00526 184 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 ATP5IP56385 69 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-202ENST00000379237 COLCA1Q6ZS62 124 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 C9JAW5 83 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 HERVK_113P61574 105 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 SPINK14Q6IE38 97 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-202ENST00000379237 ABCA4P78363 2273 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 THADAQ6YHU6 1953 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 SPRY3O43610 288 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 P0C879 139 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 C1orf53Q5VUE5 145 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 TMEM158Q8WZ71 300 aa8.84□□□□□ -0.99
USP6NL-202ENST00000379237 C6orf15Q6UXA7 325 aaPredicted RBP8.83□□□□□ -1
USP6NL-202ENST00000379237 TMEM131Q92545 1883 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 FNDC10F2Z333 226 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 SAA1P0DJI8 122 aaPredicted RBP8.83□□□□□ -1
USP6NL-202ENST00000379237 DAZAP2Q15038 168 aaPredicted RBP8.83□□□□□ -1
USP6NL-202ENST00000379237 Q86TA4 180 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 SCNM1Q9BWG6 230 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 K7ESF4 209 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 FGF6P10767 208 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 DEFB127Q9H1M4 99 aa8.83□□□□□ -1
USP6NL-202ENST00000379237 VWC2LB2RUY7 222 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 PLXNB1O43157 2135 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 BRWD1-AS2P59051 145 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 NXT2Q9NPJ8 142 aaKnown RBP8.82□□□□□ -1
USP6NL-202ENST00000379237 OTORQ9NRC9 128 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 CCL7P80098 99 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 LINC00322Q6ZN03 302 aaPredicted RBP8.82□□□□□ -1
USP6NL-202ENST00000379237 KLF14Q8TD94 323 aaPredicted RBP8.82□□□□□ -1
USP6NL-202ENST00000379237 COL4A6Q14031 1691 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 FCN3O75636 299 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 IGHV4-39P01824 125 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 C10orf55Q5SWW7 151 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 HIGD1BQ9P298 99 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 IGKV1OR2-108A0A075B7D4 117 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 AGFG2O95081 481 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 FAM104BQ5XKR9 115 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 GUSBP11Q6P575 273 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 MOGAT3Q86VF5 341 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 TEN1Q86WV5 123 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 FXYD5Q96DB9 178 aa8.82□□□□□ -1
USP6NL-202ENST00000379237 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
USP6NL-202ENST00000379237 DMDP11532 3685 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 NPYP01303 97 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 DLX1P56177 255 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 RNASE2P10153 161 aaKnown RBP8.81□□□□□ -1
USP6NL-202ENST00000379237 ID1P41134 155 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
USP6NL-202ENST00000379237 KHDC1LQ5JSQ8 128 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 KIR2DL4Q99706 377 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 TMEM14BQ9NUH8 114 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 ATG2AQ2TAZ0 1938 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 PCOLCEQ15113 449 aa8.81□□□□□ -1
USP6NL-202ENST00000379237 CACNA1BQ00975 2339 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 NDUFV3P56181 108 aaKnown RBP8.8□□□□□ -1
USP6NL-202ENST00000379237 ITLN1Q8WWA0 313 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 RAX2Q96IS3 184 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 FAM167A-AS1Q96KT0 104 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 SCGB3A1Q96QR1 104 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 TRAV2A0A0B4J234 112 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 CCDC179H3BU77 68 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 TAL2Q16559 108 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 IGHV3-72A0A0B4J1Y9 119 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 CFHR1Q03591 330 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 C3orf36Q3SXR2 165 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 WDR86Q86TI4 376 aa8.8□□□□□ -1
USP6NL-202ENST00000379237 GGNQ86UU5 652 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 IGHV1OR15-9A0A0B4J2B8 117 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 HLA-DRB4P13762 266 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 HLA-DRB4X5D2U9 266 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 C15orf53Q8NAA6 179 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 FAM110AQ9BQ89 295 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 IGHV1-45A0A0A0MS14 117 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 IGKV1-16P04430 117 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 TMEM78Q5T7P6 136 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 Q8TCH9 128 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 PROK2Q9HC23 129 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 SPANXA1Q9NS26 97 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 PROCRQ9UNN8 238 aa8.79□□□□□ -1
USP6NL-202ENST00000379237 J3KRW8 73 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 PRRG2O14669 202 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 S100A4P26447 101 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms