RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NPBQ8NG41 125 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 RAXQ9Y2V3 346 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 MRPS12O15235 138 aaKnown RBP19.92■□□□□ 0.78
C9orf40-201ENST00000376854 NDUFA3O95167 84 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 NDUFB8O95169 186 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 ARMS2P0C7Q2 107 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 ZNF414Q96IQ9 312 aa19.92■□□□□ 0.78
C9orf40-201ENST00000376854 WI2-2373I1.2A0A1W2PRP0 233 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 CEACAM3P40198 252 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 KLRD1Q13241 179 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 GNG7O60262 68 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 RIGQ13278 110 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 HES1Q14469 280 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 RAB1BQ9H0U4 201 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 MSRB2Q9Y3D2 182 aa19.91■□□□□ 0.78
C9orf40-201ENST00000376854 M0R3E3 92 aa19.9■□□□□ 0.78
C9orf40-201ENST00000376854 OR5AL1P0C617 328 aa19.89■□□□□ 0.77
C9orf40-201ENST00000376854 CRIP1P50238 77 aa19.89■□□□□ 0.77
C9orf40-201ENST00000376854 FBXL19-AS1Q494R0 122 aa19.89■□□□□ 0.77
C9orf40-201ENST00000376854 FBLN7Q53RD9 439 aa19.89■□□□□ 0.77
C9orf40-201ENST00000376854 BCL6BQ8N143 479 aaPredicted RBP19.89■□□□□ 0.77
C9orf40-201ENST00000376854 C5orf64Q2M2E5 130 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 TRAV30A0A087WSZ9 112 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 A0A1W2PRD5 423 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 A0A1W2PRF3 423 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 A0A1W2PRM7 423 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 CSN3P07498 182 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 TIMD4Q96H15 378 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 TMUB1Q9BVT8 246 aa19.88■□□□□ 0.77
C9orf40-201ENST00000376854 ADORA2A-AS1P86434 159 aa19.87■□□□□ 0.77
C9orf40-201ENST00000376854 S100A7AQ86SG5 101 aa19.87■□□□□ 0.77
C9orf40-201ENST00000376854 FANCD2OSQ96PS1 177 aa19.87■□□□□ 0.77
C9orf40-201ENST00000376854 TPPP3Q9BW30 176 aa19.87■□□□□ 0.77
C9orf40-201ENST00000376854 ST20Q9HBF5 79 aa19.87■□□□□ 0.77
C9orf40-201ENST00000376854 MFAP4P55083 255 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 C8orf49Q96NF6 230 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 MAP1LC3CQ9BXW4 147 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 TMEM191AQ9H0A3 160 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 AAMDCQ9H7C9 122 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 ARHGAP32A7KAX9 2087 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 IGLV11-55A0A075B6I3 123 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 ODF3BA8MYP8 253 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 DMRTA1Q5VZB9 504 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 GATD1Q8NB37 220 aa19.86■□□□□ 0.77
C9orf40-201ENST00000376854 COL25A1Q9BXS0 654 aaPredicted RBP19.86■□□□□ 0.77
C9orf40-201ENST00000376854 LOC105371242A0A075B767 164 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 A0A1B0GW15 77 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 hDV102S1A0JD36 115 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 M0R1W7 72 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 PDE6HQ13956 83 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 NPIPB5A8MRT5 1133 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 CT45A10P0DMU9 189 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 Q6AWC8 147 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 HSPB8Q9UJY1 196 aa19.85■□□□□ 0.77
C9orf40-201ENST00000376854 PRTN3P24158 256 aa19.84■□□□□ 0.77
C9orf40-201ENST00000376854 ARPC1AQ92747 370 aa19.84■□□□□ 0.77
C9orf40-201ENST00000376854 SPTBN4Q9H254 2564 aa19.84■□□□□ 0.77
C9orf40-201ENST00000376854 PET117Q6UWS5 81 aa19.84■□□□□ 0.77
C9orf40-201ENST00000376854 NEU4Q8WWR8 484 aaPredicted RBP19.84■□□□□ 0.77
C9orf40-201ENST00000376854 ZNF562Q6V9R5 426 aa19.83■□□□□ 0.76
C9orf40-201ENST00000376854 ORAOV1Q8WV07 137 aa19.83■□□□□ 0.76
C9orf40-201ENST00000376854 ZNF48Q96MX3 618 aaPredicted RBP19.83■□□□□ 0.76
C9orf40-201ENST00000376854 TP73-AS1Q9UF72 201 aa19.83■□□□□ 0.76
C9orf40-201ENST00000376854 TIMM8BQ9Y5J9 83 aaPredicted RBP19.83■□□□□ 0.76
C9orf40-201ENST00000376854 F8W735 103 aaPredicted RBP19.82■□□□□ 0.76
C9orf40-201ENST00000376854 UNQ5815/PRO19632Q6UWF5 114 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 NCBP2LA6PVI3 153 aaKnown RBP19.82■□□□□ 0.76
C9orf40-201ENST00000376854 H0Y8G0 127 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 CSN1S1P47710 185 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 NDPQ00604 133 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 AP5S1Q9NUS5 200 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 C21orf62Q9NYP8 219 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 CSMD1Q96PZ7 3565 aa19.82■□□□□ 0.76
C9orf40-201ENST00000376854 HSBP1L1C9JCN9 74 aa19.81■□□□□ 0.76
C9orf40-201ENST00000376854 TTC9CQ8N5M4 171 aa19.81■□□□□ 0.76
C9orf40-201ENST00000376854 MCRIP2Q9BUT9 160 aaKnown RBP19.81■□□□□ 0.76
C9orf40-201ENST00000376854 IGHV3-23P01764 117 aa19.8■□□□□ 0.76
C9orf40-201ENST00000376854 KLRB1Q12918 225 aa19.8■□□□□ 0.76
C9orf40-201ENST00000376854 TCF21O43680 179 aa19.8■□□□□ 0.76
C9orf40-201ENST00000376854 Q6ZVH6 145 aa19.8■□□□□ 0.76
C9orf40-201ENST00000376854 COL6A6A6NMZ7 2263 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 PSG9Q00887 426 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 PRSS3P2Q8NHM4 247 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 TMSB15BA0A087X1C1 80 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 SERTM2A0A1B0GWG4 89 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 TMEM189A5PLL7 270 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 FA2HQ7L5A8 372 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 DYNAPQ8N1N2 210 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 COX11Q9Y6N1 276 aa19.79■□□□□ 0.76
C9orf40-201ENST00000376854 ASH1LQ9NR48 2969 aaKnown RBP19.78■□□□□ 0.76
C9orf40-201ENST00000376854 CCDC144NLQ6NUI1 221 aa19.78■□□□□ 0.76
C9orf40-201ENST00000376854 LYZL1Q6UWQ5 148 aa19.78■□□□□ 0.76
C9orf40-201ENST00000376854 ZNF493Q6ZR52 646 aa19.78■□□□□ 0.76
C9orf40-201ENST00000376854 THYN1Q9P016 225 aa19.78■□□□□ 0.76
C9orf40-201ENST00000376854 SH2D1AO60880 128 aa19.77■□□□□ 0.76
C9orf40-201ENST00000376854 SLC25A34Q6PIV7 304 aa19.77■□□□□ 0.76
C9orf40-201ENST00000376854 IGKV2-40A0A087WW87 121 aaPredicted RBP19.77■□□□□ 0.76
C9orf40-201ENST00000376854 OR2T8A6NH00 312 aa19.77■□□□□ 0.76
C9orf40-201ENST00000376854 IGKV2D-40P01614 121 aaPredicted RBP19.77■□□□□ 0.76
C9orf40-201ENST00000376854 VMO1Q7Z5L0 202 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms