RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RABAC1Q9UI14 185 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 CELSR1Q9NYQ6 3014 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 EPG5Q9HCE0 2579 aa15.78■□□□□ 0.12
VSX1-202ENST00000376709 ZNF253O75346 499 aa15.78■□□□□ 0.12
VSX1-202ENST00000376709 GPR183P32249 361 aa15.78■□□□□ 0.12
VSX1-202ENST00000376709 CAMPP49913 170 aa15.78■□□□□ 0.12
VSX1-202ENST00000376709 ATP5L2Q7Z4Y8 100 aa15.78■□□□□ 0.12
VSX1-202ENST00000376709 IGHV3-35A0A0C4DH35 117 aa15.77■□□□□ 0.12
VSX1-202ENST00000376709 M0R3E3 92 aa15.77■□□□□ 0.12
VSX1-202ENST00000376709 PRB4P10163 310 aaPredicted RBP15.77■□□□□ 0.12
VSX1-202ENST00000376709 RPL7P18124 248 aaKnown RBP15.77■□□□□ 0.12
VSX1-202ENST00000376709 Q6ZWC4 215 aa15.77■□□□□ 0.12
VSX1-202ENST00000376709 ZNF843Q8N446 348 aa15.77■□□□□ 0.12
VSX1-202ENST00000376709 TRAV40A0A0B4J280 105 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 TRBV6-1A0A0K0K1D8 114 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 G3V318 75 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 NDUFS8O00217 210 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 PAX1P15863 534 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 BRD3OSQ6XYD6 125 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 TMEM219Q86XT9 240 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 C5orf56Q8N8D9 126 aa15.77■□□□□ 0.11
VSX1-202ENST00000376709 IGHV1-69DA0A0B4J2H0 117 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 LINC01548A6NM66 108 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 VWC2LB2RUY7 222 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 DIRC3C9JPN6 131 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 IGHV1-69P01742 117 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 PSG3Q16557 428 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 ZNF502Q8TBZ5 544 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 RCHY1Q96PM5 261 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 NAGKQ9UJ70 344 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 ZFP30Q9Y2G7 519 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 ZFHX3Q15911 3703 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 IGHV3OR16-8A0A075B7F1 116 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 GDF5OSQ5U4N7 250 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 GTSF1Q8WW33 167 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 NRGNQ92686 78 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 PSG8Q9UQ74 426 aa15.76■□□□□ 0.11
VSX1-202ENST00000376709 IGHV4-30-2A0A087WSY4 118 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 PSG9Q00887 426 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 Q71RC1 249 aaPredicted RBP15.75■□□□□ 0.11
VSX1-202ENST00000376709 OR2D3Q8NGH3 330 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 SSBP4Q9BWG4 385 aaPredicted RBP15.75■□□□□ 0.11
VSX1-202ENST00000376709 GFRA4Q9GZZ7 299 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 CLEC3BP05452 202 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 S100A7P31151 101 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 CSN1S1P47710 185 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 HBBP68871 147 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 ZC2HC1AQ96GY0 325 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 PGLYRP4Q96LB8 373 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 MOB4Q9Y3A3 225 aa15.75■□□□□ 0.11
VSX1-202ENST00000376709 LRRK2Q5S007 2527 aa15.74■□□□□ 0.11
VSX1-202ENST00000376709 A0A1B0GXF2 115 aa15.74■□□□□ 0.11
VSX1-202ENST00000376709 A8MWP6 167 aa15.74■□□□□ 0.11
VSX1-202ENST00000376709 NPIPB6E9PJ23 425 aa15.74■□□□□ 0.11
VSX1-202ENST00000376709 ASCL2Q99929 193 aa15.74■□□□□ 0.11
VSX1-202ENST00000376709 RBPMS2Q6ZRY4 209 aaKnown RBP15.73■□□□□ 0.11
VSX1-202ENST00000376709 SIGLECL1Q8N7X8 197 aa15.73■□□□□ 0.11
VSX1-202ENST00000376709 OR4B1Q8NGF8 309 aa15.73■□□□□ 0.11
VSX1-202ENST00000376709 KCNS1Q96KK3 526 aa15.73■□□□□ 0.11
VSX1-202ENST00000376709 NOL4LQ96MY1 436 aaPredicted RBP15.73■□□□□ 0.11
VSX1-202ENST00000376709 SOX21Q9Y651 276 aaPredicted RBP15.73■□□□□ 0.11
VSX1-202ENST00000376709 REC114Q7Z4M0 266 aa15.73■□□□□ 0.11
VSX1-202ENST00000376709 FAM231BA6NCW3 169 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 KLK9Q2XQG4 91 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 TOMM20LQ6UXN7 152 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 KLK9Q9UKQ9 250 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 FBN2P35556 2912 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 ZNF705FA8MVS1 300 aaPredicted RBP15.72■□□□□ 0.11
VSX1-202ENST00000376709 ZNF705DP0CH99 300 aaPredicted RBP15.72■□□□□ 0.11
VSX1-202ENST00000376709 ZNF705BP0CI00 300 aaPredicted RBP15.72■□□□□ 0.11
VSX1-202ENST00000376709 SRSF1Q07955 248 aaKnown RBP eCLIP15.72■□□□□ 0.11
VSX1-202ENST00000376709 CLEC19AQ6UXS0 136 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 RNF114Q9Y508 228 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 FAM208BQ5VWN6 2430 aa15.72■□□□□ 0.11
VSX1-202ENST00000376709 CSMD2Q7Z408 3487 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 CENPEQ02224 2701 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 GPX1P07203 203 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 PRR31Q5SQ13 230 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 C18orf32Q8TCD1 76 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 EEF1AKMT3Q96AZ1 226 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 CCDC140Q96MF4 163 aa15.71■□□□□ 0.11
VSX1-202ENST00000376709 SERTM2A0A1B0GWG4 89 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 A1L4Q6 167 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 AMTP48728 403 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 A0A1W2PS18 150 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 CT45A10P0DMU9 189 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 IGHV4-38-2P0DP08 117 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 PMCHP20382 165 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 PIFOQ8TCI5 191 aa15.7■□□□□ 0.1
VSX1-202ENST00000376709 ZFAND3Q9H8U3 227 aa15.69■□□□□ 0.1
VSX1-202ENST00000376709 SMAD5-AS1Q9Y6J3 95 aa15.69■□□□□ 0.1
VSX1-202ENST00000376709 TRBV7-1A0A0A6YYK4 115 aa15.69■□□□□ 0.1
VSX1-202ENST00000376709 TRAV41A0A0B4J266 112 aa15.69■□□□□ 0.1
VSX1-202ENST00000376709 ZNF785A8K8V0 405 aa15.69■□□□□ 0.1
VSX1-202ENST00000376709 MSMBP08118 114 aa15.68■□□□□ 0.1
VSX1-202ENST00000376709 C16orf54Q6UWD8 224 aa15.68■□□□□ 0.1
VSX1-202ENST00000376709 C8orf49Q96NF6 230 aa15.68■□□□□ 0.1
VSX1-202ENST00000376709 ALKBH7Q9BT30 221 aaPredicted RBP15.68■□□□□ 0.1
VSX1-202ENST00000376709 MEGF9Q9H1U4 602 aa15.68■□□□□ 0.1
VSX1-202ENST00000376709 LINC00527Q9UJ94 153 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms