RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 FAM19A2Q8N3H0 131 aa4.49□□□□□ -1.69
SCN2A-203ENST00000375437 CUL9Q8IWT3 2517 aa4.49□□□□□ -1.69
SCN2A-203ENST00000375437 TRBV5-3A0A0A0MS03 114 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 IGLV1-36A0A0B4J1U3 117 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 PFN1P07737 140 aaKnown RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 DMRTC2Q8IXT2 367 aaPredicted RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C8orf31Q8N9H6 132 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C9orf106Q8NAJ2 232 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 PCP4P48539 62 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 ST6GALNAC6Q969X2 333 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 IGKV2-40A0A087WW87 121 aaPredicted RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C17orf98A8MV24 154 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C1QL1O75973 258 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 IGKV2D-40P01614 121 aaPredicted RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 RPL15P61313 204 aaKnown RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 ZNF124Q15973 351 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 ZAR1Q86SH2 424 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 SPXQ9BT56 116 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 MSMBP08118 114 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 MP68P56378 58 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 GNG5P63218 68 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 PSG3Q16557 428 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 MST1LQ2TV78 715 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 MRPL36Q9P0J6 103 aaKnown RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 SPG11Q96JI7 2443 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 TRBV20-1A0A075B6N2 111 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 PRSS29PA6NIE9 313 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 BUB3O43684 328 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 EFNA2O43921 213 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 LINC00271P0C7V0 271 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 LIMS1P48059 325 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C9orf153Q5TBE3 101 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 KIR2DL5BQ8NHK3 375 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 GPHA2Q96T91 129 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 CHCHD2Q9Y6H1 151 aaPredicted RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 CD24P25063 80 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 LHX2P50458 406 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 ZNF362Q5T0B9 420 aaPredicted RBP4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C1QL2Q7Z5L3 287 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C1QL4Q86Z23 238 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 RPRMLQ8N4K4 120 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 C17orf77Q96MU5 243 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 A0A1W2PPI3 338 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
SCN2A-203ENST00000375437 PPIFP30405 207 aaKnown RBP4.47□□□□□ -1.69
SCN2A-203ENST00000375437 PLPPR1Q8TBJ4 325 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 IGF2BP2-AS1Q96M15 143 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 EXPH5Q8NEV8 1989 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 TRBV5-7A0A0A0MS05 114 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 IGHV1-3A0A0C4DH29 117 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 A0A1B0GTL3 188 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 PMS2P5A8MQ11 134 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 TMEM178BH3BS89 294 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MPZP25189 248 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 UBE2AP49459 152 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 HAMPP81172 84 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 KLRD1Q13241 179 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 PDE6HQ13956 83 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 IGHV1-24A0A0C4DH33 117 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 IGHV1-8P0DP01 117 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 PRTN3P24158 256 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 BUB1B-PAK6H3BSN5 160 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 OR11H6Q8NGC7 330 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 CITED1Q99966 193 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 NPDC1Q9NQX5 325 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-203ENST00000375437 A0A1B0GUS0 222 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MBD3L4A6NDZ8 208 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MBD3L3A6NE82 208 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MBD3L5A6NJ08 208 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-203ENST00000375437 FOXL1Q12952 345 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MBD3L2Q8NHZ7 208 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-203ENST00000375437 C9JQL5 133 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 NDUFA4O00483 81 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 D6R8Y8 96 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 RNF223E7ERA6 249 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MSRB3Q8IXL7 192 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 WBP1Q96G27 269 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 MIXL1Q9H2W2 232 aa4.47□□□□□ -1.69
SCN2A-203ENST00000375437 A0A1B0GW64 132 aa4.46□□□□□ -1.69
SCN2A-203ENST00000375437 A0A1B0GWJ7 208 aa4.46□□□□□ -1.69
SCN2A-203ENST00000375437 ADMP35318 185 aa4.46□□□□□ -1.69
SCN2A-203ENST00000375437 HERVK_113P63121 156 aa4.46□□□□□ -1.69
SCN2A-203ENST00000375437 TMEM52Q8NDY8 209 aa4.46□□□□□ -1.69
SCN2A-203ENST00000375437 DEFB105AQ8NG35 78 aa4.46□□□□□ -1.69
SCN2A-203ENST00000375437 ALPK3Q96L96 1907 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 WDR90Q96KV7 1748 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 NDUFC2O95298 119 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 ZNF250P15622 560 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 CXCL2P19875 107 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 SYNJ2BPP57105 145 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 PAQR4Q8N4S7 273 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-203ENST00000375437 NEUROG3Q9Y4Z2 214 aa4.46□□□□□ -1.7
SCN2A-203ENST00000375437 IGHV1-18A0A0C4DH31 117 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms