RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 LYL1P12980 280 aa10.05□□□□□ -0.8
NPLOC4-202ENST00000374747 LINC00158P58513 81 aa10.05□□□□□ -0.8
NPLOC4-202ENST00000374747 TRGV9Q99603 122 aa10.05□□□□□ -0.8
NPLOC4-202ENST00000374747 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
NPLOC4-202ENST00000374747 Q9UFV3 132 aa10.05□□□□□ -0.8
NPLOC4-202ENST00000374747 ADARB2-AS1A8MUL3 147 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 C10orf55Q5SWW7 151 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 MBNL3Q9NUK0 354 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 GAGE12BA1L429 117 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 SELENOKQ9Y6D0 94 aa10.04□□□□□ -0.8
NPLOC4-202ENST00000374747 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 A0A1B0GWJ7 208 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 PRO3102Q9H379 93 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 PRR31Q5SQ13 230 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 S100A7L2Q5SY68 101 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 ZNF562Q6V9R5 426 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 NBASA2RRP1 2371 aa10.03□□□□□ -0.8
NPLOC4-202ENST00000374747 TNFRSF6BO95407 300 aa10.02□□□□□ -0.8
NPLOC4-202ENST00000374747 HIST1H4AP62805 103 aaKnown RBP10.02□□□□□ -0.8
NPLOC4-202ENST00000374747 GATD1Q8NB37 220 aa10.02□□□□□ -0.8
NPLOC4-202ENST00000374747 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.8
NPLOC4-202ENST00000374747 EREGO14944 169 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 THBDP07204 575 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 COX11Q9Y6N1 276 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 SH2D1AO60880 128 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 TOMM40O96008 361 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 CDKN1AP38936 164 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 FXYD7P58549 80 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 ZCCHC24Q8N2G6 241 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 PRSS22Q9GZN4 317 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 DPH3P1Q9H4G8 78 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 PSPNO60542 156 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 CD33P20138 364 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 VDAC2P45880 294 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF138P52744 262 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 NPC2P61916 151 aa10.02□□□□□ -0.81
NPLOC4-202ENST00000374747 TRBV6-6A0A0A6YYG2 114 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 A8MWP6 167 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 RPL15P61313 204 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF474Q6S9Z5 364 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 MLNRO43193 412 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 PRB4P10163 310 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 NTF4P34130 210 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 CHAC1Q9BUX1 264 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 DOCK10Q96BY6 2186 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 SMAD7O15105 426 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 PSG3Q16557 428 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 TRAV3A0A0B4J244 114 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 QRFPP83859 136 aa10.01□□□□□ -0.81
NPLOC4-202ENST00000374747 VCYO14598 125 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 C20orf144Q9BQM9 153 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 JPT2Q9H910 190 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 SPINK8P0C7L1 97 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 C15orf32Q32M92 178 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 CST9LQ9H4G1 147 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 Q0VG73 95 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 RNF144BQ7Z419 303 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 RASL10AQ92737 203 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 TRAV41A0A0B4J266 112 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 OVOL2Q9BRP0 275 aa10□□□□□ -0.81
NPLOC4-202ENST00000374747 PAX4O43316 350 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 C9orf139Q6ZV77 190 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 WFDC12Q8WWY7 111 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 RNF5Q99942 180 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 POLR3KQ9Y2Y1 108 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 WNT2P09544 360 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 TMEM249Q2WGJ8 235 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 C15orf62A8K5M9 175 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 LYNX1G3V0Z9 82 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF688P0C7X2 276 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 LYNX1P0DP58 116 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 SELLP14151 372 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 Q6ZS49 121 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 IGHV1-8P0DP01 117 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 SRD5A1P18405 259 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 TCF15Q12870 199 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 GFRA4Q9GZZ7 299 aa9.99□□□□□ -0.81
NPLOC4-202ENST00000374747 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 SPSB3Q6PJ21 355 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 LSM4Q9Y4Z0 139 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 LINC00473A8K010 186 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 CD177Q8N6Q3 437 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 Q8TAT8 98 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 RCHY1Q96PM5 261 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 PCNX2A6NKB5 2137 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms