RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PPP1R14DQ9NXH3 145 aa9.58□□□□□ -0.88
CXCL12-202ENST00000374426 PMS2P5A8MQ11 134 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
CXCL12-202ENST00000374426 CDKN1BP46527 198 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 TMBIM6P55061 237 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 AP3S2P59780 193 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 POLR2GP62487 172 aaKnown RBP eCLIP9.57□□□□□ -0.88
CXCL12-202ENST00000374426 ID3Q02535 119 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 KIR3DS1Q14943 382 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 PATE2Q6UY27 113 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 TOMM5Q8N4H5 51 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
CXCL12-202ENST00000374426 BCL7BQ9BQE9 202 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
CXCL12-202ENST00000374426 TRAV26-1A0A087WT03 109 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 H7BYZ3 331 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 ADAP1O75689 374 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 M6PRP20645 277 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 KRTAP10-2P60368 255 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 SELENOTP62341 195 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 OR5I1Q13606 314 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 OR10J6PQ8NGY7 276 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 LRRC20Q8TCA0 184 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 GNPNAT1Q96EK6 184 aaPredicted RBP9.56□□□□□ -0.88
CXCL12-202ENST00000374426 Q9H3A6 140 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 FAT1Q14517 4588 aa9.56□□□□□ -0.88
CXCL12-202ENST00000374426 ZNF701M0R085 212 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-202ENST00000374426 CCNKO75909 580 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 HOXA5P20719 270 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 RRAS2P62070 204 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-202ENST00000374426 PYDC2Q56P42 97 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 MCFD2Q8NI22 146 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 RXFP4Q8TDU9 374 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 ZNF503Q96F45 646 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 PARD6GQ9BYG4 376 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-202ENST00000374426 ARL6Q9H0F7 186 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 ZNF331Q9NQX6 463 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-202ENST00000374426 PSENENQ9NZ42 101 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 V9GYH0 126 aa9.55□□□□□ -0.88
CXCL12-202ENST00000374426 DMBT1Q9UGM3 2413 aaPredicted RBP9.55□□□□□ -0.88
CXCL12-202ENST00000374426 A0A0J9YY99 117 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 H3BMQ9 156 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 K7EPK0 472 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 SSSCA1O60232 199 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 SNRPCP09234 159 aaKnown RBP9.54□□□□□ -0.88
CXCL12-202ENST00000374426 DLK1P80370 383 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 ESRGQ1W209 222 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 ARV1Q9H2C2 271 aa9.54□□□□□ -0.88
CXCL12-202ENST00000374426 GAGE12BA1L429 117 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 PRAC2D3DTV9 90 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 GAGE7O76087 117 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 GAGE12FP0CL80 117 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 GAGE12GP0CL81 117 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 GAGE12IP0CL82 117 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 CXCL2P19875 107 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 ANXA7P20073 488 aaKnown RBP9.53□□□□□ -0.88
CXCL12-202ENST00000374426 BTF3P20290 206 aaKnown RBP9.53□□□□□ -0.88
CXCL12-202ENST00000374426 SLC38A11Q08AI6 406 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 GFI1BQ5VTD9 330 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 DEDD2Q8WXF8 326 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 SMIM8Q96KF7 97 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 NPVFQ9HCQ7 196 aa9.53□□□□□ -0.88
CXCL12-202ENST00000374426 A0A1W2PPQ1 181 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 C9orf170A2RU37 121 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 FNDC10F2Z333 226 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 SLC17A3O00476 420 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 METTL15P1P0C7V9 234 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 UBE2MP61081 183 aaKnown RBP9.52□□□□□ -0.89
CXCL12-202ENST00000374426 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 LINC00305Q7Z4B0 112 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 ZBTB8BQ8NAP8 495 aaPredicted RBP9.52□□□□□ -0.89
CXCL12-202ENST00000374426 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 RNF24Q9Y225 148 aa9.52□□□□□ -0.89
CXCL12-202ENST00000374426 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
CXCL12-202ENST00000374426 H3BNG1 76 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 H3BTX0 84 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 RLN2P04090 185 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 PXDC1Q5TGL8 231 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 MORN5Q5VZ52 161 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 CCDC28AQ8IWP9 274 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 OR10P1Q8NGE3 313 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
CXCL12-202ENST00000374426 LINC00854A0A1B0GVQ3 168 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 SNURFLB1AK76 121 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 AGPAT2O15120 278 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 NOL3O60936 208 aaKnown RBP9.5□□□□□ -0.89
CXCL12-202ENST00000374426 ARL16Q0P5N6 197 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 ZNF546Q86UE3 836 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 BPIFA4PQ86YQ2 179 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 TMEM37Q8WXS4 190 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 TMPRSS5Q9H3S3 457 aa9.5□□□□□ -0.89
CXCL12-202ENST00000374426 MGAT4CQ9UBM8 478 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms