RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
RNU6-249P-201ENST00000363016 PATJQ8NI35 1801 aa3.97□□□□□ -1.77
RNU6-249P-201ENST00000363016 HELZP42694 1942 aaKnown RBP3.97□□□□□ -1.77
RNU6-249P-201ENST00000363016 SCN2AQ99250 2005 aa3.97□□□□□ -1.77
RNU6-249P-201ENST00000363016 RGPD8O14715 1765 aaPredicted RBP3.97□□□□□ -1.77
RNU6-249P-201ENST00000363016 RGPD5Q99666 1765 aa3.97□□□□□ -1.77
RNU6-249P-201ENST00000363016 TANC1Q9C0D5 1861 aa3.96□□□□□ -1.77
RNU6-249P-201ENST00000363016 DOCK4Q8N1I0 1966 aa3.96□□□□□ -1.77
RNU6-249P-201ENST00000363016 ARHGEF28Q8N1W1 1705 aaKnown RBP3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 MIA3Q5JRA6 1907 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 RAI1Q7Z5J4 1906 aaPredicted RBP3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 TRAV17A0A0B4J275 112 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 PEX7O00628 323 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 NUPR1O60356 82 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 PIPP12273 146 aaPredicted RBP3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 CKS2P33552 79 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 UBE2G1P62253 170 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 HIST1H4AP62805 103 aaKnown RBP3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 CFAP126Q5VTH2 177 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 FP248Q71RG6 208 aaPredicted RBP3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 TMEM252Q8N6L7 170 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 WFDC5Q8TCV5 224 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 OR8B2Q96RD0 313 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 OSTCQ9NRP0 149 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 ZNF581Q9P0T4 197 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 DPM3Q9P2X0 92 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 KLK13Q9UKR3 277 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 LY96Q9Y6Y9 160 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 RALGAPA2Q2PPJ7 1873 aa3.96□□□□□ -1.78
RNU6-249P-201ENST00000363016 RGPD2P0DJD1 1756 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 KDM3BQ7LBC6 1761 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 ROBO1Q9Y6N7 1651 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 TRAV1-1A0A0B4J248 108 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 NDUFC1O43677 76 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 COX7A1P24310 79 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 SMIM11AP58511 58 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 BLCAPP62952 87 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 MSMPQ1L6U9 139 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 TMEM61Q8N0U2 210 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 Q8N2B8 174 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 SCRT2Q9NQ03 307 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 MANBALQ9NQG1 85 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 PLA2G2EQ9NZK7 142 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 DOCK2Q92608 1830 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 KIAA1671Q9BY89 1806 aa3.95□□□□□ -1.78
RNU6-249P-201ENST00000363016 PDCD11Q14690 1871 aaKnown RBP3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 USP54Q70EL1 1684 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 PREX1Q8TCU6 1659 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 MROH2BQ7Z745 1585 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 HCFC1P51610 2035 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 C1QAP02745 245 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 SAA1P0DJI8 122 aaPredicted RBP3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 COX8AP10176 69 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 RNASE4P34096 147 aaKnown RBP3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 FGF12P61328 243 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 REG3AQ06141 175 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 ZNF791Q3KP31 576 aaPredicted RBP3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 RPL7L1Q6DKI1 246 aaKnown RBP3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 LAIR2Q6ISS4 152 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 NOXRED1Q6NXP6 359 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 ATP11AUNQ6ZP68 121 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 Q6ZPA2 131 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 BAGE3Q86Y29 109 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 BAGE2Q86Y30 109 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 PDPNQ86YL7 162 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 FAM216BQ8N7L0 139 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 FLVCR1-AS1Q8TAF5 88 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 AQP3Q92482 292 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 FGFBP2Q9BYJ0 223 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 Q9H3A6 140 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 TRAPPC1Q9Y5R8 145 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 ASXL1Q8IXJ9 1541 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 TSPOAP1O95153 1857 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 DOCK1Q14185 1865 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 ARFGEF2Q9Y6D5 1785 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 CLTCQ00610 1675 aaKnown RBP3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 SCN5AQ14524 2016 aa3.94□□□□□ -1.78
RNU6-249P-201ENST00000363016 IGLV5-37A0A075B6J1 123 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 TMEM272A0A1B0GTI8 110 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 F2Z2F3 143 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 J3QLW9 94 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 K7EM74 188 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CCL16O15467 120 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 TSHBP01222 138 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 IGHV3-48P01763 117 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 BGLAPP02818 100 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 ASAH2BP0C7U1 165 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CXCL8P10145 99 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CD28P10747 220 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CYCSP99999 105 aaKnown RBP3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 SS18Q15532 418 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 TMEM170BQ5T4T1 132 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CXCL17Q6UXB2 119 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 Q6ZQT7 251 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 MIR17HGQ75NE6 70 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 CCL28Q9NRJ3 127 aa3.93□□□□□ -1.78
RNU6-249P-201ENST00000363016 SIPA1L3O60292 1781 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms