RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 ESDP10768 282 aa12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 TDGF1P13385 188 aa12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 MMP23AO75900 390 aa12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 GAGE1Q13065 139 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 GTSF1LQ9H1H1 148 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 C7orf69Q9H7B7 122 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 Q6ZR03 302 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 NDUFA4L2Q9NRX3 87 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 SIGLEC15Q6ZMC9 328 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 SPACA3Q8IXA5 215 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 ANAPC13Q9BS18 74 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 BUB1B-PAK6H3BSN5 160 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 SSC4DQ8WTU2 575 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 SHANK2-AS3Q9BTD1 123 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
TRAPPC11-202ENST00000357207 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 LINC00527Q9UJ94 153 aa12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 MED13Q9UHV7 2174 aa12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 NCOA6Q14686 2063 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC11-202ENST00000357207 THBDP07204 575 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 PDE6HQ13956 83 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 TMEM249Q2WGJ8 235 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 LYPD2Q6UXB3 125 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 SMIM27A0A1W2PRY6 76 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 CHAC1Q9BUX1 264 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 NPFFR1Q9GZQ6 430 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 OOSP1A8MZH6 123 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 CFHR2P36980 270 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 PAX2Q02962 417 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
TRAPPC11-202ENST00000357207 CNTFRP26992 372 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 FAM168AQ92567 244 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 NCOR1P1Q9H4R4 102 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 ITLN2Q8WWU7 325 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 LINC01587Q99440 93 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 KLRD1Q13241 179 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
TRAPPC11-202ENST00000357207 C15orf65H3BRN8 121 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 NDUFS8O00217 210 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 FAM104BQ5XKR9 115 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 PRR20EP86478 221 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 PRR20CP86479 221 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 PRR20DP86480 221 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 PRR20BP86481 221 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 PRR20AP86496 221 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 RCHY1Q96PM5 261 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 CCL19Q99731 98 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 TMEM8BA6NDV4 472 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 TNFRSF6BO95407 300 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 CD28P10747 220 aa12.59□□□□□ -0.39
TRAPPC11-202ENST00000357207 TRAV41A0A0B4J266 112 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 SRSF8Q9BRL6 282 aaKnown RBP12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 YAE1D1Q9NRH1 226 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 KIR2DL5BA0A0G2JN68 375 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 KIR2DL5BA0A0G2JPC4 375 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 ZNF134P52741 427 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 MINOS1Q5TGZ0 78 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 KIR2DL5AQ8N109 375 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 MINOS1-NBL1R4GNA1 71 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 PCNX2A6NKB5 2137 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 COX6B1P14854 86 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 ADAMTSL5Q6ZMM2 481 aa12.58□□□□□ -0.4
TRAPPC11-202ENST00000357207 C17orf58Q2M2W7 97 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 C14orf178Q8N769 122 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRAV12-3A0A0B4J271 114 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 WT1-ASQ06250 92 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 SRRM4A7MD48 611 aaKnown RBP12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 SRD5A1P18405 259 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 ZGRF1Q86YA3 2104 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 WFDC12Q8WWY7 111 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms