RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 NDUFB4O95168 129 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 SIGLEC15Q6ZMC9 328 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.88□□□□□ -0.51
CTSA-202ENST00000354880 GLMPQ8WWB7 406 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 ELOVL1Q9BW60 279 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 RHPN1-AS1Q9BWJ2 59 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 Q9H3A6 140 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 A0A087X0K7 114 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 TMEM213A2RRL7 107 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 PGPA6NDG6 321 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 FOXL1Q12952 345 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
CTSA-202ENST00000354880 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
CTSA-202ENST00000354880 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
CTSA-202ENST00000354880 SLC17A3O00476 420 aa11.87□□□□□ -0.51
CTSA-202ENST00000354880 CHEK1O14757 476 aa11.87□□□□□ -0.51
CTSA-202ENST00000354880 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
CTSA-202ENST00000354880 RAX2Q96IS3 184 aa11.87□□□□□ -0.51
CTSA-202ENST00000354880 OTORQ9NRC9 128 aa11.87□□□□□ -0.51
CTSA-202ENST00000354880 EDN2P20800 178 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 BMI1P35226 326 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 FHL3Q13643 280 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 PARLQ9H300 379 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 CCL24O00175 119 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 ZNF253O75346 499 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 SLC25A5P05141 298 aaKnown RBP11.86□□□□□ -0.51
CTSA-202ENST00000354880 KRTAP10-3P60369 221 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 PSG9Q00887 426 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 GUCA2BQ16661 112 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
CTSA-202ENST00000354880 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 MEOX2P50222 304 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 SVBPQ8N300 66 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 C5orf17Q8NAS9 161 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
CTSA-202ENST00000354880 NIPSNAP3BQ9BS92 247 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 DERL1Q9BUN8 251 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 AAMDCQ9H7C9 122 aa11.85□□□□□ -0.51
CTSA-202ENST00000354880 ATRQ13535 2644 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 C2orf70A6NJV1 201 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 ADARB2-AS1A8MUL3 147 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 OR9G4Q8NGQ1 327 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 C2CD4CQ8TF44 421 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 HIST1H2BAQ96A08 127 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 PEMTQ9UBM1 199 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
CTSA-202ENST00000354880 HELTA6NFD8 242 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 PEX7O00628 323 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 CBLN1P23435 193 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 NSUN5P1Q3KNT7 163 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 NDUFA11Q86Y39 141 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 CMTM2Q8TAZ6 248 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 SLC50A1Q9BRV3 221 aa11.83□□□□□ -0.51
CTSA-202ENST00000354880 ZNF331Q9NQX6 463 aaPredicted RBP11.83□□□□□ -0.51
CTSA-202ENST00000354880 TENM1Q9UKZ4 2725 aa11.83□□□□□ -0.52
CTSA-202ENST00000354880 FOLR2P14207 255 aa11.83□□□□□ -0.52
CTSA-202ENST00000354880 RPL11P62913 178 aaKnown RBP11.83□□□□□ -0.52
CTSA-202ENST00000354880 GNG5P63218 68 aa11.83□□□□□ -0.52
CTSA-202ENST00000354880 M0QZ24 198 aa11.82□□□□□ -0.52
CTSA-202ENST00000354880 RPL35P42766 123 aaKnown RBP11.82□□□□□ -0.52
CTSA-202ENST00000354880 TCF24Q7RTU0 167 aa11.82□□□□□ -0.52
CTSA-202ENST00000354880 ATG101Q9BSB4 218 aa11.82□□□□□ -0.52
CTSA-202ENST00000354880 RPH3ALQ9UNE2 315 aa11.82□□□□□ -0.52
CTSA-202ENST00000354880 M0R3E3 92 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 SNAPINO95295 136 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 TCRAP04437 139 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 AKR1C3P42330 323 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 AWAT1Q58HT5 328 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 TVP23CQ96ET8 276 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 NRN1Q9NPD7 142 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 CNN1P51911 297 aaKnown RBP11.81□□□□□ -0.52
CTSA-202ENST00000354880 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 IGFL4Q6B9Z1 124 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 LINC00479Q96M42 142 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 SDF2L1Q9HCN8 221 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 SELENOKQ9Y6D0 94 aa11.81□□□□□ -0.52
CTSA-202ENST00000354880 ADAMTSL5Q6ZMM2 481 aa11.8□□□□□ -0.52
CTSA-202ENST00000354880 C16orf92Q96LL3 132 aa11.8□□□□□ -0.52
CTSA-202ENST00000354880 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 IGKV3-7A0A075B6H7 116 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 M0R036 132 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 HLA-DMBP28068 263 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 CSN1S1P47710 185 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 PNRC1Q12796 327 aaPredicted RBP11.79□□□□□ -0.52
CTSA-202ENST00000354880 CLRN3Q8NCR9 226 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 MLXQ9UH92 298 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 C9JCJ5 164 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 OVOL1O14753 267 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 CSN3P07498 182 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 TAS2R60P59551 318 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms