RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 LY6G6FQ5SQ64 297 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 TMEM14EPQ6UXP3 125 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 SEPSECSQ9HD40 501 aaKnown RBP7.76□□□□□ -1.17
GABPA-201ENST00000354828 NDUFA4L2Q9NRX3 87 aa7.76□□□□□ -1.17
GABPA-201ENST00000354828 A0A0G2JRQ6 117 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 AMBPP02760 352 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 ZFP36P26651 326 aaKnown RBP7.75□□□□□ -1.17
GABPA-201ENST00000354828 RNASE7Q9H1E1 156 aaKnown RBP7.75□□□□□ -1.17
GABPA-201ENST00000354828 A0A1B0GW15 77 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 C15orf62A8K5M9 175 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 ADARB2-AS1A8MUL3 147 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 HOXD3P31249 432 aaPredicted RBP7.75□□□□□ -1.17
GABPA-201ENST00000354828 CFHR3Q02985 330 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 SPINK13Q1W4C9 94 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 H7C2G1 150 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
GABPA-201ENST00000354828 HINT1P49773 126 aaPredicted RBP7.75□□□□□ -1.17
GABPA-201ENST00000354828 Q6ZRM9 215 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 RAB37Q96AX2 223 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 MRAP2Q96G30 205 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 SOX21Q9Y651 276 aaPredicted RBP7.75□□□□□ -1.17
GABPA-201ENST00000354828 LHBP01229 141 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 CBLN1P23435 193 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 ORMDL3Q8N138 153 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 VSIRQ9H7M9 311 aa7.75□□□□□ -1.17
GABPA-201ENST00000354828 IFI27P40305 119 aaPredicted RBP7.74□□□□□ -1.17
GABPA-201ENST00000354828 YPEL3P61236 119 aaPredicted RBP7.74□□□□□ -1.17
GABPA-201ENST00000354828 IL36BQ9NZH7 164 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 TGIF2-C20orf24A0A0A6YYL0 155 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 DIRC3C9JPN6 131 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 TRGC2P03986 189 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 SHANK2-AS3Q9BTD1 123 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 NAV3Q8IVL0 2385 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 DNAH12Q6ZR08 3092 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 MUC22E2RYF6 1773 aaPredicted RBP7.74□□□□□ -1.17
GABPA-201ENST00000354828 LGALS1P09382 135 aaKnown RBP7.74□□□□□ -1.17
GABPA-201ENST00000354828 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 KNCNA6PVL3 124 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 H3BUA1 57 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 HSPB9Q9BQS6 159 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 VCX2Q9H322 139 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 WFDC1Q9HC57 220 aa7.74□□□□□ -1.17
GABPA-201ENST00000354828 TRBV9A0A0B4J1U6 114 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 STAG3L2P0CL84 134 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 STAG3L3P0CL85 134 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 CEP192Q8TEP8 1941 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 F2Z2F3 143 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 APOHP02749 345 aaPredicted RBP7.73□□□□□ -1.17
GABPA-201ENST00000354828 TCRAP04437 139 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 FOXE3Q13461 319 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 RNF182Q8N6D2 247 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 C1orf147Q96MC9 270 aaPredicted RBP7.73□□□□□ -1.17
GABPA-201ENST00000354828 DENND4AQ7Z401 1863 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 BCL6BQ8N143 479 aaPredicted RBP7.73□□□□□ -1.17
GABPA-201ENST00000354828 TMEM160Q9NX00 188 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 SRP19P09132 144 aaKnown RBP7.73□□□□□ -1.17
GABPA-201ENST00000354828 GP9P14770 177 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 ERCC8Q13216 396 aa7.73□□□□□ -1.17
GABPA-201ENST00000354828 FOLR2P14207 255 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 SLURP1P55000 103 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 PUSL1Q8N0Z8 303 aaKnown RBP7.72□□□□□ -1.17
GABPA-201ENST00000354828 TRAV8-6A0A0B4J262 113 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 ZNF876PQ49A33 203 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 IGHV7-4-1A0A0J9YVY3 117 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 M0R143 59 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 IGLV3-1P01715 115 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 WT1-ASQ06250 92 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 GFI1BQ5VTD9 330 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 PRSS57Q6UWY2 283 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 JKAMPQ9P055 326 aa7.72□□□□□ -1.17
GABPA-201ENST00000354828 LYPD1Q8N2G4 141 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 C8orf31Q8N9H6 132 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 TMEM131Q92545 1883 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 IZUMO1RA6ND01 250 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 DNAJC9-AS1A6NH13 148 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 CD5LO43866 347 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 ATP5LO75964 103 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 CD28P10747 220 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 PRO1933Q9H354 126 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 FREM1Q5H8C1 2179 aa7.71□□□□□ -1.17
GABPA-201ENST00000354828 TRAV8-1A0A0A6YYK1 113 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 PGPEP1LA6NFU8 196 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 KLK9Q9UKQ9 250 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 GAGE7O76087 117 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 GAGE12FP0CL80 117 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 GAGE12GP0CL81 117 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 GAGE12IP0CL82 117 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 GZMBP10144 247 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 PAX9P55771 341 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 TTC9CQ8N5M4 171 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 DEFB104AQ8WTQ1 72 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 PAM16Q9Y3D7 125 aa7.71□□□□□ -1.18
GABPA-201ENST00000354828 J3QR89 54 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 IGHV4-31P0DP07 118 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 EVI2AP22794 236 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 C1orf194Q5T5A4 169 aa7.7□□□□□ -1.18
GABPA-201ENST00000354828 ARL6IP6Q8N6S5 226 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms