RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TMEM250H0YL14 139 aa12.07□□□□□ -0.48
RAB5C-201ENST00000346213 TGOLN2O43493 480 aa12.07□□□□□ -0.48
RAB5C-201ENST00000346213 PAGE4O60829 102 aa12.07□□□□□ -0.48
RAB5C-201ENST00000346213 MRPL32Q9BYC8 188 aaKnown RBP12.07□□□□□ -0.48
RAB5C-201ENST00000346213 RYR3Q15413 4870 aa12.07□□□□□ -0.48
RAB5C-201ENST00000346213 CBLN1P23435 193 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 S100PP25815 95 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 CEBPGP53567 150 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 OR1L4Q8NGR5 311 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 VN1R17PQ8TDU5 208 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 TXNDC17Q9BRA2 123 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 DNAJC4Q9NNZ3 241 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 TECRQ9NZ01 308 aaKnown RBP12.06□□□□□ -0.48
RAB5C-201ENST00000346213 PUS1Q9Y606 427 aaKnown RBP eCLIP12.06□□□□□ -0.48
RAB5C-201ENST00000346213 H3BQ15 152 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 GCHFRP30047 84 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 ZNF90Q03938 601 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 RHEBQ15382 184 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 MIR17HGQ75NE6 70 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 OR4X1Q8NH49 305 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 TMEM37Q8WXS4 190 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 PFDN5Q99471 154 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 PEMTQ9UBM1 199 aa12.06□□□□□ -0.48
RAB5C-201ENST00000346213 ZNF320A2RRD8 509 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 C7orf77A4D0Y5 90 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 M0R036 132 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 FABP1P07148 127 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 CTSGP08311 255 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 TAS2R45P59539 299 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 PQLC2Q6ZP29 291 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 TMEM190Q8WZ59 177 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 C21orf62Q9NYP8 219 aa12.05□□□□□ -0.48
RAB5C-201ENST00000346213 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
RAB5C-201ENST00000346213 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
RAB5C-201ENST00000346213 CLN5O75503 358 aa12.04□□□□□ -0.48
RAB5C-201ENST00000346213 C8orf88P0DMB2 117 aa12.04□□□□□ -0.48
RAB5C-201ENST00000346213 TMEM167BQ9NRX6 74 aa12.04□□□□□ -0.48
RAB5C-201ENST00000346213 ARL2-SNX15V9GYD0 113 aa12.04□□□□□ -0.48
RAB5C-201ENST00000346213 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
RAB5C-201ENST00000346213 C11orf94C9JXX5 98 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 IGLC1P0CG04 106 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 PLP1P60201 277 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 LCN12Q6JVE5 192 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 OR51M1Q9H341 326 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 SMCO4Q9NRQ5 59 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 U3KQK5 164 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 CSMD3Q7Z407 3707 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 ELOA3CA0A087WX78 387 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-201ENST00000346213 A8MZ25 164 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 PDE6DO43924 150 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 COX7A2P2O60397 106 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-201ENST00000346213 C10orf113Q5VZT2 155 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 LINC00322Q6ZN03 302 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-201ENST00000346213 DEFB125Q8N687 156 aa12.03□□□□□ -0.48
RAB5C-201ENST00000346213 STARD9Q9P2P6 4700 aa12.02□□□□□ -0.48
RAB5C-201ENST00000346213 ZNF727A8MUV8 499 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 F6UZH7 168 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 UBE2G2P60604 165 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 ZNF503Q96F45 646 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 FAM167A-AS1Q96KT0 104 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 TM2D3Q9BRN9 247 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 TUBA4BQ9H853 241 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 RETNQ9HD89 108 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 THYN1Q9P016 225 aa12.02□□□□□ -0.49
RAB5C-201ENST00000346213 RBMY1BA6NDE4 496 aaKnown RBP12.01□□□□□ -0.49
RAB5C-201ENST00000346213 RBMY1EA6NEQ0 496 aaKnown RBP12.01□□□□□ -0.49
RAB5C-201ENST00000346213 B4DEV8 164 aa12.01□□□□□ -0.49
RAB5C-201ENST00000346213 RBMY1DP0C7P1 496 aaKnown RBP12.01□□□□□ -0.49
RAB5C-201ENST00000346213 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-201ENST00000346213 ATP5G3P48201 142 aa12.01□□□□□ -0.49
RAB5C-201ENST00000346213 Q56UQ5 140 aa12.01□□□□□ -0.49
RAB5C-201ENST00000346213 OR2K2Q8NGT1 345 aa12.01□□□□□ -0.49
RAB5C-201ENST00000346213 A0A087WWC5 75 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 RAB5BP61020 215 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 RNF212Q495C1 297 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 FAM106AQ4KMX7 169 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 RCHY1Q96PM5 261 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 SMIM7Q9BQ49 75 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 PARLQ9H300 379 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 DOK5Q9P104 306 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 NAT8Q9UHE5 227 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 YTHDF2Q9Y5A9 579 aaKnown RBP12□□□□□ -0.49
RAB5C-201ENST00000346213 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 LINC00587B1AMM8 73 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 OR7C2O60412 319 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 255.7 ms