RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZNF580Q9UK33 172 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 PAM16Q9Y3D7 125 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 S4R3C0 116 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 OR2J3O76001 311 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 GPX1P07203 203 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 OR5G3P0C626 314 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 ARL14EPLP0DKL9 152 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 LINC00310P59036 64 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 RHOBP62745 196 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 OR5I1Q13606 314 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 ORAOV1Q8WV07 137 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 DERL1Q9BUN8 251 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
CXCL12-201ENST00000343575 GRIFINA4D1Z8 144 aa11.43□□□□□ -0.58
CXCL12-201ENST00000343575 CBLN1P23435 193 aa11.43□□□□□ -0.58
CXCL12-201ENST00000343575 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
CXCL12-201ENST00000343575 NPFFR1Q9GZQ6 430 aa11.43□□□□□ -0.58
CXCL12-201ENST00000343575 A0A1B0GUS0 222 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 C20orf202A1L168 122 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 ZNF253O75346 499 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 LINC00869P0C866 280 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 RAB31Q13636 194 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 C10orf99Q6UWK7 81 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 PRSS22Q9GZN4 317 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 NF1P21359 2839 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 SCO2A0A1W2PP80 73 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 IGLV1-40P01703 118 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 GATA2P23769 480 aaPredicted RBP11.42□□□□□ -0.58
CXCL12-201ENST00000343575 GCHFRP30047 84 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 CTRLP40313 264 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 RHOGP84095 191 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 PRR20EP86478 221 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 PRR20CP86479 221 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 PRR20DP86480 221 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 PRR20BP86481 221 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 PRR20AP86496 221 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 KCNS1Q96KK3 526 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 FBXL7Q9UJT9 491 aa11.42□□□□□ -0.58
CXCL12-201ENST00000343575 SNURFLB1AK76 121 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 HILS1P60008 231 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 GCSAMLQ5JQS6 135 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 OSTCQ9NRP0 149 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 SERTAD4Q9NUC0 356 aa11.41□□□□□ -0.58
CXCL12-201ENST00000343575 BRI3O95415 125 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 HLA-DQA1P01909 254 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 PCP4P48539 62 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 C15orf32Q32M92 178 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 ZNF329Q86UD4 541 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 TMEM167BQ9NRX6 74 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
CXCL12-201ENST00000343575 IGHV3-23P01764 117 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 SCGB2A2Q13296 93 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 PMCHL1Q16048 86 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 SPATA45Q537H7 98 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 RASL11AQ6T310 242 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 LCNL1Q6ZST4 164 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 Q6ZSV7 163 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 STPG3Q8N7X2 389 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 THYN1Q9P016 225 aa11.4□□□□□ -0.59
CXCL12-201ENST00000343575 MRPS16Q9Y3D3 137 aaKnown RBP11.4□□□□□ -0.59
CXCL12-201ENST00000343575 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 PGPEP1LA6NFU8 196 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 RNASE1P07998 156 aaKnown RBP11.39□□□□□ -0.59
CXCL12-201ENST00000343575 KRTDAPP60985 99 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 BATFQ16520 125 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 TDRG1Q3Y452 100 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 ZNF502Q8TBZ5 544 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 TRGV9Q99603 122 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 GNB4Q9HAV0 340 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 DNAJC4Q9NNZ3 241 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 NRN1Q9NPD7 142 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 MRPL27Q9P0M9 148 aaKnown RBP11.39□□□□□ -0.59
CXCL12-201ENST00000343575 V9GYV3 84 aa11.39□□□□□ -0.59
CXCL12-201ENST00000343575 CRLF1O75462 422 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 IGHG4P01861 327 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 IGLC2P0DOY2 106 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
CXCL12-201ENST00000343575 Q8N976 141 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 ZNF418Q8TF45 676 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-201ENST00000343575 TXN2Q99757 166 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 NAT8BQ9UHF3 227 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
CXCL12-201ENST00000343575 PSMB11A5LHX3 300 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 H3BUA1 57 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms