RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 IGHV4-39P01824 125 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 PRORYQ9H606 182 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 LY96Q9Y6Y9 160 aa15.68■□□□□ 0.1
SEMA6C-201ENST00000341697 FAM120AOSQ5T036 256 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 GZMBP10144 247 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 ABCA1O95477 2261 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 ADMP35318 185 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 POU2AF1Q16633 256 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 IL17RELQ6ZVW7 336 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 ERASQ7Z444 233 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 NXT2Q9NPJ8 142 aaKnown RBP15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 COX6CP09669 75 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 IGHV4-30-2A0A087WSY4 118 aa15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 HOXA3O43365 443 aaPredicted RBP15.67■□□□□ 0.1
SEMA6C-201ENST00000341697 TRAV8-1A0A0A6YYK1 113 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 H3BRM9 83 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 SRSF1Q07955 248 aaKnown RBP eCLIP15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 FAM19A2Q8N3H0 131 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 OR11H6Q8NGC7 330 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 DPH3Q96FX2 82 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 KIAA1549LQ6ZVL6 1849 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 PIEZO1Q92508 2521 aa15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 RPLP1P05386 114 aaKnown RBP15.66■□□□□ 0.1
SEMA6C-201ENST00000341697 SH2D1AO60880 128 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 INSP01308 110 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 ZNF415Q09FC8 603 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 IFI27P40305 119 aaPredicted RBP15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 FXYD7P58549 80 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 DEFB131AP59861 70 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 JOSD1Q15040 202 aaPredicted RBP15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 DEFB121Q5J5C9 76 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 PCDH15Q96QU1 1955 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 DEFB112Q30KQ8 113 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 CACNA1AO00555 2505 aa15.65■□□□□ 0.1
SEMA6C-201ENST00000341697 H7C2G1 150 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 SERF1AO75920 110 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 PMCHL2Q9BQD1 86 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 FOXL1Q12952 345 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 TRAV8-6A0A0B4J262 113 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 NDUFA4O00483 81 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 COL5A1-AS1Q5SY13 56 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 C10orf105Q8TEF2 133 aa15.64■□□□□ 0.09
SEMA6C-201ENST00000341697 ELANEP08246 267 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 HINT1P49773 126 aaPredicted RBP15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 C1orf194Q5T5A4 169 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 ORMDL2Q53FV1 153 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 LYZL1Q6UWQ5 148 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 VCX2Q9H322 139 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 CYSLTR1Q9Y271 337 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 VPREB3Q9UKI3 123 aa15.63■□□□□ 0.09
SEMA6C-201ENST00000341697 TRBV24-1A0A075B6N3 115 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 TCF21O43680 179 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 LINC00614P0C842 121 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 COTL1Q14019 142 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 UBE2E2Q96LR5 201 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 DENND4AQ7Z401 1863 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 TRGV1A0A0A0MS02 117 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 EVI2AP22794 236 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 TMEM249Q2WGJ8 235 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 DTX2Q86UW9 622 aa15.62■□□□□ 0.09
SEMA6C-201ENST00000341697 SPG11Q96JI7 2443 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 HBDP02042 147 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 PRADC1Q9BSG0 188 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 NOTCH2Q04721 2471 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 SHANK1Q9Y566 2161 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 IGHV4-59P01825 116 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 HOXA5P20719 270 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 RPL24P83731 157 aaKnown RBP15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 Q86TA4 180 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 ANKHD1Q8IWZ3 2542 aaKnown RBP15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 NOTCH3Q9UM47 2321 aa15.61■□□□□ 0.09
SEMA6C-201ENST00000341697 TTC9CQ8N5M4 171 aa15.6■□□□□ 0.09
SEMA6C-201ENST00000341697 MRAP2Q96G30 205 aa15.6■□□□□ 0.09
SEMA6C-201ENST00000341697 ERCC8Q13216 396 aa15.6■□□□□ 0.09
SEMA6C-201ENST00000341697 TOMM7Q9P0U1 55 aa15.59■□□□□ 0.09
SEMA6C-201ENST00000341697 LOC107984156A0A0G2JMH3 177 aa15.59■□□□□ 0.09
SEMA6C-201ENST00000341697 H3BUA1 57 aa15.59■□□□□ 0.09
SEMA6C-201ENST00000341697 ARL17AQ8IVW1 177 aa15.59■□□□□ 0.09
SEMA6C-201ENST00000341697 NRGNQ92686 78 aa15.59■□□□□ 0.09
SEMA6C-201ENST00000341697 RASL11AQ6T310 242 aa15.59■□□□□ 0.09
SEMA6C-201ENST00000341697 C10orf142B7Z368 130 aa15.58■□□□□ 0.09
SEMA6C-201ENST00000341697 CHCHD5Q9BSY4 110 aa15.58■□□□□ 0.09
SEMA6C-201ENST00000341697 PRDM13Q9H4Q3 707 aa15.58■□□□□ 0.09
SEMA6C-201ENST00000341697 TRBV19A0A075B6N1 114 aa15.58■□□□□ 0.08
SEMA6C-201ENST00000341697 CENPVL3A0A0U1RRI6 287 aa15.58■□□□□ 0.08
SEMA6C-201ENST00000341697 TCTEX1D4Q5JR98 221 aa15.58■□□□□ 0.08
SEMA6C-201ENST00000341697 LYPD6Q86Y78 171 aa15.58■□□□□ 0.08
SEMA6C-201ENST00000341697 RNF182Q8N6D2 247 aa15.58■□□□□ 0.08
SEMA6C-201ENST00000341697 MUC22E2RYF6 1773 aaPredicted RBP15.58■□□□□ 0.08
SEMA6C-201ENST00000341697 DPH3P1Q9H4G8 78 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 LINC00479Q96M42 142 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 NDUFA3O95167 84 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 IGLC1P0CG04 106 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 DDTP30046 118 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 SMIM12Q96EX1 92 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 JKAMPQ9P055 326 aa15.57■□□□□ 0.08
SEMA6C-201ENST00000341697 RPL36AP83881 106 aaKnown RBP15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 CFAP161Q6P656 301 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 RPL36ALQ969Q0 106 aaKnown RBP15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 CHCHD1Q96BP2 118 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms