RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
SDCBP2-201ENST00000339987 SAMD13Q5VXD3 122 aa13.43□□□□□ -0.26
SDCBP2-201ENST00000339987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.43□□□□□ -0.26
SDCBP2-201ENST00000339987 SUN5Q8TC36 379 aa13.43□□□□□ -0.26
SDCBP2-201ENST00000339987 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
SDCBP2-201ENST00000339987 OR10J4P0C629 311 aa13.42□□□□□ -0.26
SDCBP2-201ENST00000339987 NBEAP1P0C6P0 100 aa13.42□□□□□ -0.26
SDCBP2-201ENST00000339987 SLC7A5P1Q8MH63 180 aa13.42□□□□□ -0.26
SDCBP2-201ENST00000339987 DCANP1Q8TF63 244 aa13.42□□□□□ -0.26
SDCBP2-201ENST00000339987 TMEM167BQ9NRX6 74 aa13.42□□□□□ -0.26
SDCBP2-201ENST00000339987 ZNF586Q9NXT0 402 aa13.42□□□□□ -0.26
SDCBP2-201ENST00000339987 IGKV3-7A0A075B6H7 116 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 TRBV19A0A075B6N1 114 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 K7EQG2 157 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 ZNF253O75346 499 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 HBE1P02100 147 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 PDE6HQ13956 83 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 OXLD1Q5BKU9 147 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 GBGT1Q8N5D6 347 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 PCNPQ8WW12 178 aaKnown RBP13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 MED9Q9NWA0 146 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 NOTCH3Q9UM47 2321 aa13.41□□□□□ -0.26
SDCBP2-201ENST00000339987 OR4C46A6NHA9 309 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 TEX46H3BTG2 121 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 DNASE2O00115 360 aaPredicted RBP13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 SOCS3O14543 225 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 GUCA2BQ16661 112 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 SAMD5Q5TGI4 173 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 COMMD7Q86VX2 200 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
SDCBP2-201ENST00000339987 EGFEM1PQ0D2K5 195 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 BEAN1Q3B7T3 259 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 ZMAT5Q9UDW3 170 aaKnown RBP13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 ZNF256Q9Y2P7 627 aaPredicted RBP13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 H3BTX0 84 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 ISLRO14498 428 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 NDUFB4O95168 129 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 SNRPCP09234 159 aaKnown RBP13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 S100A1P23297 94 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 TFPI2P48307 235 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 PSMB3P49720 205 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 WFDC3Q8IUB2 231 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 IQCF2Q8IXL9 164 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 BLNKQ8WV28 456 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 TMPRSS5Q9H3S3 457 aa13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 ZNF331Q9NQX6 463 aaPredicted RBP13.39□□□□□ -0.27
SDCBP2-201ENST00000339987 NBEAL1Q6ZS30 2694 aa13.38□□□□□ -0.27
SDCBP2-201ENST00000339987 SLC17A3O00476 420 aa13.38□□□□□ -0.27
SDCBP2-201ENST00000339987 LYPD6BQ8NI32 183 aa13.38□□□□□ -0.27
SDCBP2-201ENST00000339987 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
SDCBP2-201ENST00000339987 CLEC5AQ9NY25 188 aa13.38□□□□□ -0.27
SDCBP2-201ENST00000339987 CMYA5Q8N3K9 4069 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 TRAV8-2A0A0B4J237 113 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 A0A1B0GV50 99 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 G3V4G9 280 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 ID1P41134 155 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 PPT1P50897 306 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 PSG9Q00887 426 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
SDCBP2-201ENST00000339987 PMS2P11Q13670 270 aa13.36□□□□□ -0.27
SDCBP2-201ENST00000339987 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
SDCBP2-201ENST00000339987 CITED4Q96RK1 184 aa13.36□□□□□ -0.27
SDCBP2-201ENST00000339987 FAM110AQ9BQ89 295 aa13.36□□□□□ -0.27
SDCBP2-201ENST00000339987 ARL2-SNX15V9GYD0 113 aa13.36□□□□□ -0.27
SDCBP2-201ENST00000339987 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
SDCBP2-201ENST00000339987 CMC4P56277 68 aaPredicted RBP13.35□□□□□ -0.27
SDCBP2-201ENST00000339987 SNRPD3P62318 126 aaKnown RBP13.35□□□□□ -0.27
SDCBP2-201ENST00000339987 CCL20P78556 96 aa13.35□□□□□ -0.27
SDCBP2-201ENST00000339987 ZNF688P0C7X2 276 aa13.34□□□□□ -0.27
SDCBP2-201ENST00000339987 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
SDCBP2-201ENST00000339987 Q9H3A6 140 aa13.34□□□□□ -0.27
SDCBP2-201ENST00000339987 AAMDCQ9H7C9 122 aa13.34□□□□□ -0.27
SDCBP2-201ENST00000339987 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
SDCBP2-201ENST00000339987 PRELID1Q9Y255 219 aa13.34□□□□□ -0.27
SDCBP2-201ENST00000339987 KRTAP10-11P60412 298 aa13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 KPRPQ5T749 579 aaPredicted RBP13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 IGFL4Q6B9Z1 124 aa13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 MRPL53Q96EL3 112 aaKnown RBP13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 MAP6D1Q9H9H5 199 aa13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 MANBALQ9NQG1 85 aa13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 SORL1Q92673 2214 aa13.33□□□□□ -0.28
SDCBP2-201ENST00000339987 FAM74A7A6NL05 159 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 ICAM4Q14773 271 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 PSG3Q16557 428 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 EXOC3-AS1Q8N2X6 119 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 RNF182Q8N6D2 247 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 GNG13Q9P2W3 67 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 YTHDF2Q9Y5A9 579 aaKnown RBP13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
SDCBP2-201ENST00000339987 RAB19A4D1S5 217 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 IFNA1P01562 189 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 CD7P09564 240 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 HLA-DMBP28068 263 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 CD81P60033 236 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 UBE2G2P60604 165 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms