RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 HOXB4P17483 251 aaPredicted RBP16.15■□□□□ 0.18
RUNX3-202ENST00000338888 GATA4P43694 442 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 FXYD2P54710 66 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 PRSS33Q8NF86 280 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 SLC25A39Q9BZJ4 359 aaPredicted RBP16.15■□□□□ 0.18
RUNX3-202ENST00000338888 IGHV1-46P01743 117 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 GLRXP35754 106 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 MRGPRG-AS1Q2M3A8 158 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 VMA21Q3ZAQ7 101 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 BCL6BQ8N143 479 aaPredicted RBP16.15■□□□□ 0.18
RUNX3-202ENST00000338888 TNFRSF14Q92956 283 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 TTTY13Q9BZ97 58 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 PROCRQ9UNN8 238 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 PSG8Q9UQ74 426 aa16.15■□□□□ 0.18
RUNX3-202ENST00000338888 MUC6Q6W4X9 2439 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 PRR33A8MZF0 331 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 K7ERJ3 54 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 IGHG3P01860 377 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 PSG3Q16557 428 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 LYZL1Q6UWQ5 148 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 ORMDL3Q8N138 153 aa16.14■□□□□ 0.17
RUNX3-202ENST00000338888 SPENQ96T58 3664 aaKnown RBP16.13■□□□□ 0.17
RUNX3-202ENST00000338888 ZNF207O43670 478 aaKnown RBP16.13■□□□□ 0.17
RUNX3-202ENST00000338888 ZNF493Q6ZR52 646 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 SMKR1H3BMG3 65 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 NDUFS7O75251 213 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 CEACAM3P40198 252 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 FAM104BQ5XKR9 115 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 S100A7AQ86SG5 101 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 C18orf15Q96N68 181 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 SIGMAR1Q99720 223 aa16.13■□□□□ 0.17
RUNX3-202ENST00000338888 C8orf49Q96NF6 230 aa16.12■□□□□ 0.17
RUNX3-202ENST00000338888 PLCE1Q9P212 2302 aa16.12■□□□□ 0.17
RUNX3-202ENST00000338888 CCL11P51671 97 aa16.12■□□□□ 0.17
RUNX3-202ENST00000338888 TMEM200BQ69YZ2 307 aa16.12■□□□□ 0.17
RUNX3-202ENST00000338888 IGLV3-9A0A075B6K5 115 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 IGKV2D-26A0A0A0MRZ7 120 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 MRPL51Q4U2R6 128 aaKnown RBP16.11■□□□□ 0.17
RUNX3-202ENST00000338888 TMEM75Q8N9X5 138 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 TMEM14CQ9P0S9 112 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 U3KQK5 164 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 PTPRZ1P23471 2315 aaPredicted RBP16.11■□□□□ 0.17
RUNX3-202ENST00000338888 PAX8Q06710 450 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 Q6AWC8 147 aa16.11■□□□□ 0.17
RUNX3-202ENST00000338888 SMG1Q96Q15 3661 aaKnown RBP16.1■□□□□ 0.17
RUNX3-202ENST00000338888 TRBV6-1A0A0K0K1D8 114 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 TSSC4Q9Y5U2 329 aaPredicted RBP16.1■□□□□ 0.17
RUNX3-202ENST00000338888 CACNA1GO43497 2377 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 TMEM189A5PLL7 270 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 K7EMI3 77 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 RBP4P02753 201 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 WT1P19544 449 aaPredicted RBP16.1■□□□□ 0.17
RUNX3-202ENST00000338888 RPL27AP46776 148 aaKnown RBP16.1■□□□□ 0.17
RUNX3-202ENST00000338888 VGLL1Q99990 258 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 TMEM133Q9H2Q1 129 aa16.1■□□□□ 0.17
RUNX3-202ENST00000338888 TRBV19A0A075B6N1 114 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 M0R3E3 92 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 NPYP01303 97 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 CCL8P80075 99 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 NGBQ9NPG2 151 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 SPTBN2O15020 2390 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 K7EQM0 130 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 FCN3O75636 299 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 CNTFRP26992 372 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 PVRIGQ6DKI7 326 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 FAM169BQ8N8A8 192 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 CEP250Q9BV73 2442 aa16.09■□□□□ 0.17
RUNX3-202ENST00000338888 CKS2P33552 79 aa16.08■□□□□ 0.17
RUNX3-202ENST00000338888 GVINP1Q7Z2Y8 2422 aa16.08■□□□□ 0.16
RUNX3-202ENST00000338888 PPIAL4EA0A075B759 164 aa16.08■□□□□ 0.16
RUNX3-202ENST00000338888 PPIAL4FP0DN26 164 aa16.08■□□□□ 0.16
RUNX3-202ENST00000338888 NHP2Q9NX24 153 aaKnown RBP16.08■□□□□ 0.16
RUNX3-202ENST00000338888 WI2-2373I1.2A0A1W2PRP0 233 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 CT45A10P0DMU9 189 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 WFDC2Q14508 124 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 TEX36Q5VZQ5 186 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 SIGLEC15Q6ZMC9 328 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 CHAC1Q9BUX1 264 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 GAGE12HA6NDE8 117 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 FDCSPQ8NFU4 85 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 DCHS1Q96JQ0 3298 aa16.07■□□□□ 0.16
RUNX3-202ENST00000338888 CD300EQ496F6 205 aaPredicted RBP16.06■□□□□ 0.16
RUNX3-202ENST00000338888 CLUHP3Q96NS8 147 aa16.06■□□□□ 0.16
RUNX3-202ENST00000338888 RASL11BQ9BPW5 248 aa16.06■□□□□ 0.16
RUNX3-202ENST00000338888 BOD1L1Q8NFC6 3051 aa16.06■□□□□ 0.16
RUNX3-202ENST00000338888 SCGB1A1P11684 91 aa16.06■□□□□ 0.16
RUNX3-202ENST00000338888 PHLDA1Q8WV24 401 aaPredicted RBP16.05■□□□□ 0.16
RUNX3-202ENST00000338888 SCNM1Q9BWG6 230 aa16.05■□□□□ 0.16
RUNX3-202ENST00000338888 A0A1W2PRD5 423 aa16.05■□□□□ 0.16
RUNX3-202ENST00000338888 A0A1W2PRF3 423 aa16.05■□□□□ 0.16
RUNX3-202ENST00000338888 A0A1W2PRM7 423 aa16.05■□□□□ 0.16
RUNX3-202ENST00000338888 HHLA3Q9XRX5 114 aa16.04■□□□□ 0.16
RUNX3-202ENST00000338888 MC5RP33032 325 aa16.04■□□□□ 0.16
RUNX3-202ENST00000338888 ZNF474Q6S9Z5 364 aaPredicted RBP16.04■□□□□ 0.16
RUNX3-202ENST00000338888 AKAP13Q12802 2813 aa16.04■□□□□ 0.16
RUNX3-202ENST00000338888 TWIST1Q15672 202 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 ZNF562Q6V9R5 426 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 SEM1Q6ZVN7 128 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 SPANXB1Q9NS25 103 aaPredicted RBP16.03■□□□□ 0.16
RUNX3-202ENST00000338888 HIGD1BQ9P298 99 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms