RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SLC17A3O00476 420 aa11.24□□□□□ -0.61
CDK5RAP3-201ENST00000338399 GALR1P47211 349 aa11.24□□□□□ -0.61
CDK5RAP3-201ENST00000338399 PARLQ9H300 379 aa11.24□□□□□ -0.61
CDK5RAP3-201ENST00000338399 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
CDK5RAP3-201ENST00000338399 A0A1W2PS18 150 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SIGLEC15Q6ZMC9 328 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 REC114Q7Z4M0 266 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 C1QL4Q86Z23 238 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 LGALS9O00182 355 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SMPXQ9UHP9 88 aa11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-201ENST00000338399 TMEM213A2RRL7 107 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 CHEK1O14757 476 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 KRTAP10-3P60369 221 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 CTAG1AP78358 180 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 PDE6HQ13956 83 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 RAX2Q96IS3 184 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
CDK5RAP3-201ENST00000338399 A0A087X0K7 114 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 A8MWP6 167 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 GNG5P63218 68 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SVBPQ8N300 66 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 RPH3ALQ9UNE2 315 aa11.21□□□□□ -0.61
CDK5RAP3-201ENST00000338399 A0A1B0GUS0 222 aa11.21□□□□□ -0.62
CDK5RAP3-201ENST00000338399 PSG9Q00887 426 aa11.21□□□□□ -0.62
CDK5RAP3-201ENST00000338399 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.62
CDK5RAP3-201ENST00000338399 EPDR1Q9UM22 224 aa11.21□□□□□ -0.62
CDK5RAP3-201ENST00000338399 CCL24O00175 119 aa11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 FAM74A3Q4VXF1 159 aa11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ATRAIDQ6UW56 229 aa11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 C2CD4CQ8TF44 421 aa11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-201ENST00000338399 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 PEX7O00628 323 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 PRB4P10163 310 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 NSUN5P1Q3KNT7 163 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TVP23CQ96ET8 276 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 HELTA6NFD8 242 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 M0R036 132 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 M0R3E3 92 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ZNF253O75346 499 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 SNAPINO95295 136 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 CBLN1P23435 193 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 RPL35P42766 123 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 FOXL1Q12952 345 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 FHL3Q13643 280 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TMEM241Q24JQ0 296 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 CLRN3Q8NCR9 226 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 HIST1H2BAQ96A08 127 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TCEAL7Q9BRU2 100 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 NAT8Q9UHE5 227 aa11.19□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TEP1Q99973 2627 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-201ENST00000338399 IGKV3-7A0A075B6H7 116 aa11.18□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TCRAP04437 139 aa11.18□□□□□ -0.62
CDK5RAP3-201ENST00000338399 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
CDK5RAP3-201ENST00000338399 BMI1P35226 326 aa11.18□□□□□ -0.62
CDK5RAP3-201ENST00000338399 AKR1C3P42330 323 aa11.18□□□□□ -0.62
CDK5RAP3-201ENST00000338399 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.623e-6■■■■□ 20.4
CDK5RAP3-201ENST00000338399 TRAV34A0A0B4J273 112 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 FOLR2P14207 255 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 FLI1Q01543 452 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 AWAT1Q58HT5 328 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 LINC00518Q8N0U6 118 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 OR9G4Q8NGQ1 327 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 SLC50A1Q9BRV3 221 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 JMJD1CQ15652 2540 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 MEOX2P50222 304 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms