RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 A0A1W2PPI3 338 aa15.33■□□□□ 0.05
NPLOC4-201ENST00000331134 SH2D1AO60880 128 aa15.33■□□□□ 0.05
NPLOC4-201ENST00000331134 VDAC2P45880 294 aaPredicted RBP15.33■□□□□ 0.05
NPLOC4-201ENST00000331134 KLRD1Q13241 179 aa15.33■□□□□ 0.05
NPLOC4-201ENST00000331134 SORL1Q92673 2214 aa15.33■□□□□ 0.05
NPLOC4-201ENST00000331134 DNAL4O96015 105 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 TNFRSF18Q9Y5U5 241 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 IGHV2-26A0A0B4J1V2 119 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 LYPD6Q86Y78 171 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 TEX29Q8N6K0 151 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 IGHV1-8P0DP01 117 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 PSMG4Q5JS54 123 aa15.33■□□□□ 0.04
NPLOC4-201ENST00000331134 PCNX3Q9H6A9 2034 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 LYPD2Q6UXB3 125 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 FAM57AQ8TBR7 257 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 ESDP10768 282 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 SNRPD3P62318 126 aaKnown RBP15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 C1orf122Q6ZSJ8 110 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 TRGV9Q99603 122 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 SLC25A15Q9Y619 301 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 NDPQ00604 133 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 ETDBQ3ZM63 59 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 Q6ZR03 302 aa15.32■□□□□ 0.04
NPLOC4-201ENST00000331134 K7EN84 100 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 CKS1BP61024 79 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 ADAMTSL5Q6ZMM2 481 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 VCX2Q9H322 139 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 A8MWV9 139 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 UBE2L6O14933 153 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 NPC2P61916 151 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 MRPL52Q86TS9 123 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 NDUFS8O00217 210 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 ZNF134P52741 427 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 TEX43Q6ZNM6 134 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 Q86TA4 180 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 GAFA1Q96PS6 74 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 IGHV1-3A0A0C4DH29 117 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 C15orf32Q32M92 178 aa15.31■□□□□ 0.04
NPLOC4-201ENST00000331134 TOMM40O96008 361 aa15.3■□□□□ 0.04
NPLOC4-201ENST00000331134 PLSCR4Q9NRQ2 329 aa15.3■□□□□ 0.04
NPLOC4-201ENST00000331134 SMAD7O15105 426 aaKnown RBP15.3■□□□□ 0.04
NPLOC4-201ENST00000331134 SIGLEC9Q9Y336 463 aa15.3■□□□□ 0.04
NPLOC4-201ENST00000331134 IGLV3-1P01715 115 aa15.3■□□□□ 0.04
NPLOC4-201ENST00000331134 ATP5J2P56134 94 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 TMEM14BQ9NUH8 114 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 TRAV40A0A0B4J280 105 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 MMP23AO75900 390 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 LAGE3Q14657 143 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 DUX5Q96PT3 197 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 CHAC1Q9BUX1 264 aa15.29■□□□□ 0.04
NPLOC4-201ENST00000331134 IGHV1-24A0A0C4DH33 117 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 TMEM249Q2WGJ8 235 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 C14orf178Q8N769 122 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 SLC50A1Q9BRV3 221 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 PGPEP1Q9NXJ5 209 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 ZNF883P0CG24 379 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 CEACAM8P31997 349 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 ORMDL2Q53FV1 153 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 MUC6Q6W4X9 2439 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 NPFFO15130 113 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 RRN3P1Q2M238 152 aa15.28■□□□□ 0.04
NPLOC4-201ENST00000331134 FRMD6-AS1P0C7T7 363 aa15.27■□□□□ 0.04
NPLOC4-201ENST00000331134 CNTFRP26992 372 aa15.27■□□□□ 0.04
NPLOC4-201ENST00000331134 PAX2Q02962 417 aa15.27■□□□□ 0.04
NPLOC4-201ENST00000331134 TMEM219Q86XT9 240 aa15.27■□□□□ 0.04
NPLOC4-201ENST00000331134 DTX1Q86Y01 620 aa15.27■□□□□ 0.04
NPLOC4-201ENST00000331134 TMEM178BH3BS89 294 aa15.27■□□□□ 0.03
NPLOC4-201ENST00000331134 ZNF474Q6S9Z5 364 aaPredicted RBP15.27■□□□□ 0.03
NPLOC4-201ENST00000331134 ERCC8Q13216 396 aa15.27■□□□□ 0.03
NPLOC4-201ENST00000331134 COA6Q5JTJ3 125 aaKnown RBP15.27■□□□□ 0.03
NPLOC4-201ENST00000331134 LMO1P25800 156 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 TRAV21A0A0B4J279 112 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 MDS2Q8NDY4 140 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 RAX2Q96IS3 184 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 PYGO2Q9BRQ0 406 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 FGF23Q9GZV9 251 aaPredicted RBP15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 PLXNA2O75051 1894 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 WT1-ASQ06250 92 aa15.26■□□□□ 0.03
NPLOC4-201ENST00000331134 KIR2DL5BA0A0G2JN68 375 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 KIR2DL5BA0A0G2JPC4 375 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 CCL25O15444 150 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 KIR2DL5AQ8N109 375 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 HAX1O00165 279 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 TPSG1Q9NRR2 321 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 K7EP13 123 aa15.25■□□□□ 0.03
NPLOC4-201ENST00000331134 SRRM4A7MD48 611 aaKnown RBP15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 C8orf49Q96NF6 230 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 DUX3Q96PT4 197 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 CD59P13987 128 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 GAGE1Q13065 139 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 GAGE2BQ13066 116 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 GAGE2EQ4V326 116 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 CENPVQ7Z7K6 275 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 SLC25A2Q9BXI2 301 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 GAGE2DQ9UEU5 116 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 CCDC168Q8NDH2 2452 aa15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 ZNF672Q499Z4 452 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 ITLN2Q8WWU7 325 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-201ENST00000331134 ABCA2Q9BZC7 2435 aa15.23■□□□□ 0.03
NPLOC4-201ENST00000331134 MED12LQ86YW9 2145 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms