RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TIMM8BQ9Y5J9 83 aaPredicted RBP15.03■□□□□ -0
RTN4-201ENST00000317610 ABCA1O95477 2261 aa15.03■□□□□ -0
RTN4-201ENST00000317610 FAM106CPP0CH98 169 aa15.03■□□□□ -0
RTN4-201ENST00000317610 SEC11AP67812 179 aa15.03■□□□□ -0
RTN4-201ENST00000317610 FOXE3Q13461 319 aa15.03■□□□□ -0
RTN4-201ENST00000317610 FAM106AQ4KMX7 169 aa15.03■□□□□ -0
RTN4-201ENST00000317610 PIP4P2Q8N4L2 257 aa15.03■□□□□ -0
RTN4-201ENST00000317610 SIGLEC8Q9NYZ4 499 aa15.03■□□□□ -0
RTN4-201ENST00000317610 BOD1L1Q8NFC6 3051 aa15.03■□□□□ -0
RTN4-201ENST00000317610 PLGLAQ15195 96 aa15.02■□□□□ -0
RTN4-201ENST00000317610 FAM104BQ5XKR9 115 aa15.02■□□□□ -0
RTN4-201ENST00000317610 OR1N2Q8NGR9 330 aa15.02■□□□□ -0
RTN4-201ENST00000317610 C8orf49Q96NF6 230 aa15.02■□□□□ -0
RTN4-201ENST00000317610 PEF1Q9UBV8 284 aaKnown RBP15.02■□□□□ -0
RTN4-201ENST00000317610 OTOGLQ3ZCN5 2332 aa15.02□□□□□ -0.01
RTN4-201ENST00000317610 M0R3E3 92 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 IL4P05112 153 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 CT45A10P0DMU9 189 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 COX7A1P24310 79 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 LOXL1Q08397 574 aaPredicted RBP15.01□□□□□ -0.01
RTN4-201ENST00000317610 LGALS9BQ3B8N2 356 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 LGALS9CQ6DKI2 356 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 COX8CQ7Z4L0 72 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 RP1L1Q8IWN7 2480 aaPredicted RBP15.01□□□□□ -0.01
RTN4-201ENST00000317610 ZGRF1Q86YA3 2104 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 SERTM2A0A1B0GWG4 89 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 D6R8Y8 96 aa15.01□□□□□ -0.01
RTN4-201ENST00000317610 TRAV8-6A0A0B4J262 113 aa15□□□□□ -0.01
RTN4-201ENST00000317610 CNIH1O95406 144 aa15□□□□□ -0.01
RTN4-201ENST00000317610 OCIAD2Q56VL3 154 aa15□□□□□ -0.01
RTN4-201ENST00000317610 TMEM97Q5BJF2 176 aa15□□□□□ -0.01
RTN4-201ENST00000317610 LYZL1Q6UWQ5 148 aa15□□□□□ -0.01
RTN4-201ENST00000317610 TPPP3Q9BW30 176 aa15□□□□□ -0.01
RTN4-201ENST00000317610 PKDREJQ9NTG1 2253 aa15□□□□□ -0.01
RTN4-201ENST00000317610 PPIAL4CA0A0B4J2A2 164 aa15□□□□□ -0.01
RTN4-201ENST00000317610 PPIAL4GP0DN37 164 aa15□□□□□ -0.01
RTN4-201ENST00000317610 FCGR2BP31994 310 aaPredicted RBP15□□□□□ -0.01
RTN4-201ENST00000317610 PAX8Q06710 450 aa15□□□□□ -0.01
RTN4-201ENST00000317610 LDLRAD2Q5SZI1 272 aa15□□□□□ -0.01
RTN4-201ENST00000317610 PRELID3AQ96N28 172 aa15□□□□□ -0.01
RTN4-201ENST00000317610 RAB1BQ9H0U4 201 aa15□□□□□ -0.01
RTN4-201ENST00000317610 S100A7AQ86SG5 101 aa14.99□□□□□ -0.01
RTN4-201ENST00000317610 ORMDL3Q8N138 153 aa14.99□□□□□ -0.01
RTN4-201ENST00000317610 TMEM213A2RRL7 107 aa14.99□□□□□ -0.01
RTN4-201ENST00000317610 TMEM189A5PLL7 270 aa14.99□□□□□ -0.01
RTN4-201ENST00000317610 B9A039 149 aa14.99□□□□□ -0.01
RTN4-201ENST00000317610 ZNF48Q96MX3 618 aaPredicted RBP14.99□□□□□ -0.01
RTN4-201ENST00000317610 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
RTN4-201ENST00000317610 C7orf71A4D174 169 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 TIMM23O14925 209 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 SH2D1AO60880 128 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 AMN1Q8IY45 258 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 BOD1L2Q8IYS8 172 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 OR8A1Q8NGG7 326 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 KLK10O43240 276 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 RNF151Q2KHN1 245 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 ARL6IP6Q8N6S5 226 aa14.98□□□□□ -0.01
RTN4-201ENST00000317610 CACNA1HO95180 2353 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 NBR2O15453 112 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 PRB4P10163 310 aaPredicted RBP14.97□□□□□ -0.01
RTN4-201ENST00000317610 MRPL51Q4U2R6 128 aaKnown RBP14.97□□□□□ -0.01
RTN4-201ENST00000317610 LOC389332A0A1B0GUA5 103 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 SNAI2O43623 268 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 NDUFA3O95167 84 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 BCL6BQ8N143 479 aaPredicted RBP14.97□□□□□ -0.01
RTN4-201ENST00000317610 NPBQ8NG41 125 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 NPFFR1Q9GZQ6 430 aa14.97□□□□□ -0.01
RTN4-201ENST00000317610 HBDP02042 147 aa14.96□□□□□ -0.01
RTN4-201ENST00000317610 GFRALQ6UXV0 394 aa14.96□□□□□ -0.01
RTN4-201ENST00000317610 RABAC1Q9UI14 185 aa14.96□□□□□ -0.01
RTN4-201ENST00000317610 CFHR4Q92496 578 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 SH3BGRL2Q9UJC5 107 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 GAGE12BA1L429 117 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 FBLL1A6NHQ2 334 aaKnown RBP14.95□□□□□ -0.02
RTN4-201ENST00000317610 LYNX1G3V0Z9 82 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 GNG7O60262 68 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 LYNX1P0DP58 116 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 NHLH1Q02575 133 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 COTL1Q14019 142 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 LY6G5BQ8NDX9 201 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 FANCD2OSQ96PS1 177 aa14.95□□□□□ -0.02
RTN4-201ENST00000317610 IGLV11-55A0A075B6I3 123 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 F8W735 103 aaPredicted RBP14.94□□□□□ -0.02
RTN4-201ENST00000317610 H3BRM9 83 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 SIVA1O15304 175 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 CACNG7P62955 275 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 OR9G4Q8NGQ1 327 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 TMSB15BA0A087X1C1 80 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 NPIPB5A8MRT5 1133 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 SMAD7O15105 426 aaKnown RBP14.94□□□□□ -0.02
RTN4-201ENST00000317610 MFAP4P55083 255 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 UFSP1Q6NVU6 142 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 PRR25Q96S07 402 aa14.94□□□□□ -0.02
RTN4-201ENST00000317610 KLF17Q5JT82 389 aaPredicted RBP14.93□□□□□ -0.02
RTN4-201ENST00000317610 HSD52Q0P140 79 aa14.93□□□□□ -0.02
RTN4-201ENST00000317610 Q8NA96 180 aa14.93□□□□□ -0.02
RTN4-201ENST00000317610 OR11H6Q8NGC7 330 aa14.93□□□□□ -0.02
RTN4-201ENST00000317610 IFI27L1Q96BM0 104 aa14.93□□□□□ -0.02
RTN4-201ENST00000317610 CNOT1A5YKK6 2376 aaKnown RBP14.93□□□□□ -0.02
RTN4-201ENST00000317610 A6NDN8 102 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms