RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 IL4P05112 153 aa13.12□□□□□ -0.31
SSH3-201ENST00000308127 IFI27P40305 119 aaPredicted RBP13.12□□□□□ -0.31
SSH3-201ENST00000308127 PRSS3P2Q8NHM4 247 aa13.12□□□□□ -0.31
SSH3-201ENST00000308127 NEU4Q8WWR8 484 aaPredicted RBP13.12□□□□□ -0.31
SSH3-201ENST00000308127 RPEQ96AT9 228 aa13.12□□□□□ -0.31
SSH3-201ENST00000308127 A0A1B0GUT8 65 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 ARF6P62330 175 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 LINC00311Q8N616 119 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 OTORQ9NRC9 128 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 OVOL3O00110 214 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 PRRG2O14669 202 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
SSH3-201ENST00000308127 ZNF492Q9P255 531 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 ONECUT1Q9UBC0 465 aa13.11□□□□□ -0.31
SSH3-201ENST00000308127 TNFRSF13BO14836 293 aaPredicted RBP13.1□□□□□ -0.31
SSH3-201ENST00000308127 LIPFP07098 398 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 OR5AL1P0C617 328 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 AP5S1Q9NUS5 200 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 IGHV2-70DA0A0C4DH43 119 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 I3L2K1 104 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 PTPRQQ9UMZ3 2332 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 BUB1B-PAK6H3BSN5 160 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 KLRD1Q13241 179 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 C3orf36Q3SXR2 165 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 AMN1Q8IY45 258 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 Q8TAT8 98 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 ABHD17AQ96GS6 310 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 SCRT2Q9NQ03 307 aa13.1□□□□□ -0.31
SSH3-201ENST00000308127 TIMM23O14925 209 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 CRXO43186 299 aaPredicted RBP13.09□□□□□ -0.31
SSH3-201ENST00000308127 CRYGBP07316 175 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 GFRALQ6UXV0 394 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 D6R8Y8 96 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 HLA-DRB1P01911 266 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 FA2HQ7L5A8 372 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 LINC01560Q8TB33 94 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 NDFIP1Q9BT67 221 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 VPS13CQ709C8 3753 aa13.09□□□□□ -0.31
SSH3-201ENST00000308127 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
SSH3-201ENST00000308127 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
SSH3-201ENST00000308127 IGLV1-47P01700 117 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 HES1Q14469 280 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 CT83Q5H943 113 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 SHISA9B4DS77 424 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 NPIPB6E9PJ23 425 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 K7EIM0 57 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 HAX1O00165 279 aa13.08□□□□□ -0.32
SSH3-201ENST00000308127 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 HLA-DMBP28068 263 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 S100A7P31151 101 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 ANKRD39Q53RE8 183 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 SIGLEC15Q6ZMC9 328 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 TMEM75Q8N9X5 138 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 PPIAL4CA0A0B4J2A2 164 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 PPIAL4GP0DN37 164 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 GRNP28799 593 aaKnown RBP13.07□□□□□ -0.32
SSH3-201ENST00000308127 LYZL1Q6UWQ5 148 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 PRSS57Q6UWY2 283 aa13.07□□□□□ -0.32
SSH3-201ENST00000308127 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 PSG9Q00887 426 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 ZNF747Q9BV97 191 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 GFRA4Q9GZZ7 299 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 FAM71F2Q6NXP2 309 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
SSH3-201ENST00000308127 SCNM1Q9BWG6 230 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 SOX21Q9Y651 276 aaPredicted RBP13.05□□□□□ -0.32
SSH3-201ENST00000308127 A0A096LNJ9 63 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 GAS8-AS1O95177 125 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 GPR183P32249 361 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 NHLH1Q02575 133 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 PET117Q6UWS5 81 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 C18orf15Q96N68 181 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
SSH3-201ENST00000308127 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.04□□□□□ -0.32
SSH3-201ENST00000308127 PLP1P60201 277 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 CACNG7P62955 275 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 RIGQ13278 110 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 PSG3Q16557 428 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 C2orf91Q6ZV80 131 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 PPIFP30405 207 aaKnown RBP13.04□□□□□ -0.32
SSH3-201ENST00000308127 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 DEFB125Q8N687 156 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 MSRB1Q9NZV6 116 aa13.04□□□□□ -0.32
SSH3-201ENST00000308127 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 RBPJQ06330 500 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 LINC01545Q5VT33 79 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 ZNF414Q96IQ9 312 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms