RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 TRAV8-4A0A0B4J246 113 aa13.66□□□□□ -0.22
CNTNAP3-201ENST00000297668 CFPP27918 469 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 B4DSR2 109 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 A0A087X0K7 114 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 FCN3O75636 299 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 RPL36AP83881 106 aaKnown RBP13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 ZNF474Q6S9Z5 364 aaPredicted RBP13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 RPL36ALQ969Q0 106 aaKnown RBP13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 C14orf178Q8N769 122 aaPredicted RBP13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 HS3ST6Q96QI5 342 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 SCN5AQ14524 2016 aa13.65□□□□□ -0.22
CNTNAP3-201ENST00000297668 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.23
CNTNAP3-201ENST00000297668 A0A087WX48 190 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 ZC2HC1BQ5TFG8 222 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 LYPD2Q6UXB3 125 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 SHANK1Q9Y566 2161 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 IGHV3-73A0A0B4J1V6 119 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 DTX2Q86UW9 622 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 DEFB104AQ8WTQ1 72 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 TMEM158Q8WZ71 300 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 ZNF407Q9C0G0 2248 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 Q6ZS92 163 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 AMN1Q8IY45 258 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 LINC00479Q96M42 142 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 MST1LQ2TV78 715 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
CNTNAP3-201ENST00000297668 TEX43Q6ZNM6 134 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 PRADC1Q9BSG0 188 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 DOCK8Q8NF50 2099 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 NSUN5P1Q3KNT7 163 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 Q86TA4 180 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 LSM4Q9Y4Z0 139 aaKnown RBP13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 C9JQL5 133 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 ZNF415Q09FC8 603 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 SNHG12Q9BXW3 62 aa13.63□□□□□ -0.23
CNTNAP3-201ENST00000297668 SAP30O75446 220 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 CSTL1Q9H114 145 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 C11orf68Q9H3H3 251 aaKnown RBP13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 S100A7L2Q5SY68 101 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 TRGV1A0A0A0MS02 117 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 COL8A2P25067 703 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 A0A1W2PPI3 338 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 SHANK2-AS3Q9BTD1 123 aa13.62□□□□□ -0.23
CNTNAP3-201ENST00000297668 MED13LQ71F56 2210 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 SMKR1H3BMG3 65 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 NPC2P61916 151 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 SRSF8Q9BRL6 282 aaKnown RBP13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 RHPN1-AS1Q9BWJ2 59 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 LY6HO94772 140 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 PRTN3P24158 256 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 PDE6HQ13956 83 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 JPT2Q9H910 190 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 COX11Q9Y6N1 276 aa13.61□□□□□ -0.23
CNTNAP3-201ENST00000297668 PAX4O43316 350 aa13.6□□□□□ -0.23
CNTNAP3-201ENST00000297668 CDKN1BP46527 198 aa13.6□□□□□ -0.23
CNTNAP3-201ENST00000297668 RASL10AQ92737 203 aa13.6□□□□□ -0.23
CNTNAP3-201ENST00000297668 ANK1P16157 1881 aa13.6□□□□□ -0.23
CNTNAP3-201ENST00000297668 SPINK8P0C7L1 97 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 GFRA4Q9GZZ7 299 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 FAM223BA6NKX1 122 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 ETV2O00321 342 aaPredicted RBP13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 FAM223AQ8IWN6 122 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 ARMS2P0C7Q2 107 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 LMO1P25800 156 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 GATD1Q8NB37 220 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 C1orf159Q96HA4 380 aa13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 C1orf147Q96MC9 270 aaPredicted RBP13.59□□□□□ -0.23
CNTNAP3-201ENST00000297668 Q0VG73 95 aa13.58□□□□□ -0.23
CNTNAP3-201ENST00000297668 TMEM155Q4W5P6 130 aa13.58□□□□□ -0.23
CNTNAP3-201ENST00000297668 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 PFN1P07737 140 aaKnown RBP13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 SAA4P35542 130 aa13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 KIR3DS1Q14943 382 aa13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 PHLDA1Q8WV24 401 aaPredicted RBP13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 VGLL1Q99990 258 aa13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 LIME1Q9H400 295 aa13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 IGHV3-53P01767 116 aa13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 ZNF562Q6V9R5 426 aa13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 DLX4Q92988 240 aaPredicted RBP13.58□□□□□ -0.24
CNTNAP3-201ENST00000297668 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 E7EQL1 145 aa13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 OVOL3O00110 214 aa13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 BPESC1Q9GZL8 116 aa13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 GNLYP22749 145 aa13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
CNTNAP3-201ENST00000297668 ANAPC10Q9UM13 185 aa13.56□□□□□ -0.24
CNTNAP3-201ENST00000297668 A0A087WWL8 130 aa13.56□□□□□ -0.24
CNTNAP3-201ENST00000297668 ERCC8Q13216 396 aa13.56□□□□□ -0.24
CNTNAP3-201ENST00000297668 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
CNTNAP3-201ENST00000297668 PAX9P55771 341 aa13.56□□□□□ -0.24
CNTNAP3-201ENST00000297668 DOCK11Q5JSL3 2073 aa13.56□□□□□ -0.24
CNTNAP3-201ENST00000297668 CD5LO43866 347 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms