RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 KIR3DS1Q14943 382 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 TEX36Q5VZQ5 186 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 FAM90A2PQ658T7 463 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 DENND4AQ7Z401 1863 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 NLRC5Q86WI3 1866 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 INS-IGF2F8WCM5 200 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 INSP01308 110 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
FNDC1-201ENST00000297267 TNFSF13O75888 250 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
FNDC1-201ENST00000297267 C17orf77Q96MU5 243 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 EDA2RQ9HAV5 297 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 POLR3KQ9Y2Y1 108 aaPredicted RBP12.48□□□□□ -0.41
FNDC1-201ENST00000297267 ZNF726P1Q15940 193 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 J3QW42 95 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 ATP6V0E1O15342 81 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 ARTNQ5T4W7 220 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 TEX29Q8N6K0 151 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 K7ERJ3 54 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 MMP23AO75900 390 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 HOXD3P31249 432 aaPredicted RBP12.48□□□□□ -0.41
FNDC1-201ENST00000297267 ZNF124Q15973 351 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 SIGMAR1Q99720 223 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 A0A1W2PPI3 338 aa12.48□□□□□ -0.41
FNDC1-201ENST00000297267 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
FNDC1-201ENST00000297267 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
FNDC1-201ENST00000297267 RNASE2P10153 161 aaKnown RBP12.47□□□□□ -0.41
FNDC1-201ENST00000297267 LAMTOR3Q9UHA4 124 aa12.47□□□□□ -0.41
FNDC1-201ENST00000297267 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
FNDC1-201ENST00000297267 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
FNDC1-201ENST00000297267 A0A1B0GWJ7 208 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 SLC25A20O43772 301 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 MPZP25189 248 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 MYO7BQ6PIF6 2116 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 DEFB131AP59861 70 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 TMEM75Q8N9X5 138 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
FNDC1-201ENST00000297267 GAGE12JA6NER3 117 aa12.46□□□□□ -0.42
FNDC1-201ENST00000297267 ZNF883P0CG24 379 aa12.46□□□□□ -0.42
FNDC1-201ENST00000297267 GAGE1Q13065 139 aa12.46□□□□□ -0.42
FNDC1-201ENST00000297267 GAGE4Q13068 117 aa12.46□□□□□ -0.42
FNDC1-201ENST00000297267 GAGE5Q13069 117 aa12.46□□□□□ -0.42
FNDC1-201ENST00000297267 TCF15Q12870 199 aa12.46□□□□□ -0.42
FNDC1-201ENST00000297267 Q6AWC8 147 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
FNDC1-201ENST00000297267 KIAA1671Q9BY89 1806 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 SPSB3Q6PJ21 355 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 PFN2P35080 140 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 C5orf64Q2M2E5 130 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 A8MWV9 139 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 GAGE2AQ6NT46 116 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 TMEM14EPQ6UXP3 125 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 NDUFB8O95169 186 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 ZC2HC1AQ96GY0 325 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 HEATR5AQ86XA9 2040 aa12.45□□□□□ -0.42
FNDC1-201ENST00000297267 ORMDL2Q53FV1 153 aa12.44□□□□□ -0.42
FNDC1-201ENST00000297267 TRGV11A0A075B6L2 103 aa12.44□□□□□ -0.42
FNDC1-201ENST00000297267 TNFRSF6BO95407 300 aa12.44□□□□□ -0.42
FNDC1-201ENST00000297267 DENND4CQ5VZ89 1909 aa12.44□□□□□ -0.42
FNDC1-201ENST00000297267 TEX43Q6ZNM6 134 aa12.44□□□□□ -0.42
FNDC1-201ENST00000297267 FAM166AQ6J272 317 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 Q6ZR03 302 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 ESDP10768 282 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
FNDC1-201ENST00000297267 ADAMTSL5Q6ZMM2 481 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 MBD3L4A6NDZ8 208 aaPredicted RBP12.43□□□□□ -0.42
FNDC1-201ENST00000297267 MBD3L3A6NE82 208 aaPredicted RBP12.43□□□□□ -0.42
FNDC1-201ENST00000297267 MBD3L5A6NJ08 208 aaPredicted RBP12.43□□□□□ -0.42
FNDC1-201ENST00000297267 PRB2P02812 416 aaPredicted RBP12.43□□□□□ -0.42
FNDC1-201ENST00000297267 MBD3L2Q8NHZ7 208 aaPredicted RBP12.43□□□□□ -0.42
FNDC1-201ENST00000297267 MRAPQ8TCY5 172 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 MS4A6AQ9H2W1 248 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 TRAV9-1A0A075B6T8 112 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 Q96MF0 132 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 A0A1B0GW15 77 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 SLAQ13239 276 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 ATP6V0BQ99437 205 aa12.43□□□□□ -0.42
FNDC1-201ENST00000297267 OVOL1O14753 267 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 HSD52Q0P140 79 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 Q86TA4 180 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 TMEM242Q9NWH2 141 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 C9JAW5 83 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 ZNF134P52741 427 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 GGTLC3B5MD39 225 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 F6UB75 175 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 PSCAO43653 123 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 GATA4P43694 442 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 FAM110DQ8TAY7 271 aaPredicted RBP12.42□□□□□ -0.42
FNDC1-201ENST00000297267 RITA1Q96K30 269 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 TRGV9Q99603 122 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 ANAPC1Q9H1A4 1944 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 JPT2Q9H910 190 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms