RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 Q6ZR03 302 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 PATE1Q8WXA2 126 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 EEF1AKMT3Q96AZ1 226 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 METRNQ9UJH8 293 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 IGKV1-12A0A0C4DH73 117 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 A0A0U1RRA0 63 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 SOCS3O14543 225 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 IGKV1D-12P01611 117 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 RSPO2Q6UXX9 243 aaPredicted RBP9.47□□□□□ -0.89
SNIP1-201ENST00000296215 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 PLEKHB2Q96CS7 222 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 LYZL4Q96KX0 146 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 CCL21O00585 134 aa9.46□□□□□ -0.89
SNIP1-201ENST00000296215 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.89
SNIP1-201ENST00000296215 TMEM190Q8WZ59 177 aa9.46□□□□□ -0.89
SNIP1-201ENST00000296215 LRRK1Q38SD2 2015 aa9.46□□□□□ -0.89
SNIP1-201ENST00000296215 MYO7BQ6PIF6 2116 aa9.46□□□□□ -0.89
SNIP1-201ENST00000296215 ZNF503Q96F45 646 aa9.46□□□□□ -0.89
SNIP1-201ENST00000296215 CCL26Q9Y258 94 aa9.46□□□□□ -0.89
SNIP1-201ENST00000296215 UBR2Q8IWV8 1755 aa9.46□□□□□ -0.9
SNIP1-201ENST00000296215 SHANK1Q9Y566 2161 aa9.46□□□□□ -0.9
SNIP1-201ENST00000296215 E9PLN8 166 aa9.46□□□□□ -0.9
SNIP1-201ENST00000296215 C16orf47Q6ZP98 133 aaPredicted RBP9.46□□□□□ -0.9
SNIP1-201ENST00000296215 CCL4L1Q8NHW4 92 aa9.46□□□□□ -0.9
SNIP1-201ENST00000296215 RGPD3A6NKT7 1758 aaPredicted RBP9.46□□□□□ -0.9
SNIP1-201ENST00000296215 RGPD4Q7Z3J3 1758 aa9.46□□□□□ -0.9
SNIP1-201ENST00000296215 M0R381 172 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 Q6ZNB5 142 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 TNS1Q9HBL0 1735 aaKnown RBP9.45□□□□□ -0.9
SNIP1-201ENST00000296215 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 LGALS9O00182 355 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 ZGRF1Q86YA3 2104 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 MYLKQ15746 1914 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 FAM186AA6NE01 2351 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 CCL14Q16627 93 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
SNIP1-201ENST00000296215 ARHGAP21Q5T5U3 1957 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 MED12LQ86YW9 2145 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 FANCMQ8IYD8 2048 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 IFI6P09912 130 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 CXCL5P42830 114 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 CXorf51AA0A1B0GTR3 108 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 CXCL12P48061 93 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 NDUFA11Q86Y39 141 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 FGFBP3Q8TAT2 258 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 PRORYQ9H606 182 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 MOB4Q9Y3A3 225 aa9.44□□□□□ -0.9
SNIP1-201ENST00000296215 RGPD2P0DJD1 1756 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 NXPH1P58417 271 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 CD69Q07108 199 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 LPAL2Q16609 132 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 APC2O95996 2303 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 DOT1LQ8TEK3 1739 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 GFRA3O60609 400 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 TIMM17BO60830 172 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 Q8N8P6 123 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 UBL5Q9BZL1 73 aa9.43□□□□□ -0.9
SNIP1-201ENST00000296215 CASP8AP2Q9UKL3 1982 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 IGKV1-39P01597 117 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 IGKV1D-39P04432 117 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 TNFAIP6P98066 277 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-201ENST00000296215 RPL39P5Q59GN2 51 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 C15orf61A6NNL5 157 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 BTAF1O14981 1849 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
SNIP1-201ENST00000296215 LILRA6Q6PI73 481 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 SDK1Q7Z5N4 2213 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 Q86TA4 180 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 GHRHP01286 108 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 CRYGSP22914 178 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-201ENST00000296215 PMAIP1Q13794 54 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
SNIP1-201ENST00000296215 MTCL1Q9Y4B5 1905 aaKnown RBP9.41□□□□□ -0.9
SNIP1-201ENST00000296215 IGHV1-45A0A0A0MS14 117 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 LINC00271P0C7V0 271 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 RHOHQ15669 191 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 UCN2Q96RP3 112 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 TM4SF5O14894 197 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 Q6ZS49 121 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 COX14Q96I36 57 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 TRAV17A0A0B4J275 112 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 EFNA4P52798 201 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 SSC5DA1L4H1 1573 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 GUSBP11Q6P575 273 aa9.41□□□□□ -0.9
SNIP1-201ENST00000296215 WNT9BO14905 357 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 BAALC-AS2P0C853 105 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 RPUSD1Q9UJJ7 312 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms