RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 COX8AP10176 69 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 AAMDCQ9H7C9 122 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 MGAQ8IWI9 3026 aa11.69□□□□□ -0.54
CCNF-201ENST00000293968 IGHV3-23P01764 117 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 IGLC1P0CG04 106 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 TWIST1Q15672 202 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 ABCA4P78363 2273 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 IGHV3-35A0A0C4DH35 117 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 NBASA2RRP1 2371 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 SAP30O75446 220 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 PTPRZ1P23471 2315 aaPredicted RBP11.68□□□□□ -0.54
CCNF-201ENST00000293968 CACNA1BQ00975 2339 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 PRSS33Q8NF86 280 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 ONECUT1Q9UBC0 465 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 DSCAML1Q8TD84 2053 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 INS-IGF2F8WCM5 200 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 CKS2P33552 79 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 LINC01545Q5VT33 79 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
CCNF-201ENST00000293968 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 A6NDN8 102 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 GNG7O60262 68 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 IGFL4Q6B9Z1 124 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 K7EM74 188 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 CRYGCP07315 174 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 IGFL2Q6UWQ7 119 aa11.67□□□□□ -0.54
CCNF-201ENST00000293968 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 A1L4Q6 167 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 RHOGP84095 191 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 TRBV19A0A075B6N1 114 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 IGKV2-40A0A087WW87 121 aaPredicted RBP11.66□□□□□ -0.54
CCNF-201ENST00000293968 IGKV2D-40P01614 121 aaPredicted RBP11.66□□□□□ -0.54
CCNF-201ENST00000293968 PRO3102Q9H379 93 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 SIGLEC8Q9NYZ4 499 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 APC2O95996 2303 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 SMG1Q96Q15 3661 aaKnown RBP11.66□□□□□ -0.54
CCNF-201ENST00000293968 FBLL1A6NHQ2 334 aaKnown RBP11.66□□□□□ -0.54
CCNF-201ENST00000293968 PRRG2O14669 202 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 IGLV2-11P01706 119 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 Q8TAT8 98 aa11.66□□□□□ -0.54
CCNF-201ENST00000293968 PSG3Q16557 428 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 RNF125Q96EQ8 232 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 ORM1P02763 201 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 TMEM11P17152 192 aa11.65□□□□□ -0.54
CCNF-201ENST00000293968 IGKV1-17P01599 117 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 GCSHP23434 173 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 C2orf91Q6ZV80 131 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 COL27A1Q8IZC6 1860 aaPredicted RBP11.64□□□□□ -0.55
CCNF-201ENST00000293968 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 PRSS1P07477 247 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
CCNF-201ENST00000293968 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
CCNF-201ENST00000293968 BCL6BQ8N143 479 aaPredicted RBP11.64□□□□□ -0.55
CCNF-201ENST00000293968 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
CCNF-201ENST00000293968 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 PPIFP30405 207 aaKnown RBP11.63□□□□□ -0.55
CCNF-201ENST00000293968 SEC11AP67812 179 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 PCP2Q8IVA1 136 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 SHANK2-AS3Q9BTD1 123 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 A0A0G2JNJ9 132 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 Q9UFV3 132 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 RALYQ9UKM9 306 aaKnown RBP11.63□□□□□ -0.55
CCNF-201ENST00000293968 A0A0G2JLM5 398 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 NCBP2LA6PVI3 153 aaKnown RBP11.63□□□□□ -0.55
CCNF-201ENST00000293968 TEX22C9J3V5 150 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 SH2D1AO60880 128 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 CRIP1P50238 77 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 MRGPRG-AS1Q2M3A8 158 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 FAM71F2Q6NXP2 309 aa11.63□□□□□ -0.55
CCNF-201ENST00000293968 PPIAL4CA0A0B4J2A2 164 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 PPIAL4GP0DN37 164 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 TIMM23O14925 209 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 HBDP02042 147 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 EVI2AP22794 236 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 SIGLEC15Q6ZMC9 328 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 DMXL2Q8TDJ6 3036 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 FAM57AQ8TBR7 257 aa11.62□□□□□ -0.55
CCNF-201ENST00000293968 RBPJQ06330 500 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 TMEM14CQ9P0S9 112 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 SPCS1Q9Y6A9 102 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 TNRC18O15417 2968 aaPredicted RBP11.61□□□□□ -0.55
CCNF-201ENST00000293968 I3L2K1 104 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 MRPL51Q4U2R6 128 aaKnown RBP11.61□□□□□ -0.55
CCNF-201ENST00000293968 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 TTTY13Q9BZ97 58 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms