RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MRPL30Q8TCC3 161 aaKnown RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 TMEM106AQ96A25 262 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 PRADC1Q9BSG0 188 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 OR2J1Q9GZK6 312 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 C11orf68Q9H3H3 251 aaKnown RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 CST9LQ9H4G1 147 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 CA10Q9NS85 328 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 CCDC167Q9P0B6 97 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 NUFIP1Q9UHK0 495 aaKnown RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 AK3Q9UIJ7 227 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 ZNF443Q9Y2A4 671 aaPredicted RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 SETXQ7Z333 2677 aaKnown RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 FLNCQ14315 2725 aa3.28□□□□□ -1.89
CD44-202ENST00000278385 CSMD1Q96PZ7 3565 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 TRAV38-1A0A0B4J264 116 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 DPRXA6NFQ7 191 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 C9JQL5 133 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 COX7A2LO14548 114 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 BCL2L11O43521 198 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 LYZL6O75951 148 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 LTAP01374 205 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 IFNA17P01571 189 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 UCHL1P09936 223 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 P0DMU3 169 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 FAM231AP0DMU4 169 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 FAM231CP0DMU5 169 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 DAPP51397 102 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 GNB1P62873 340 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 C1orf140Q5VVS0 124 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 GLT8D1Q68CQ7 371 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 LYPD2Q6UXB3 125 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 AAED1Q7RTV5 226 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 HMGN2P46Q86SG4 172 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 LYG1Q8N1E2 194 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 ZNF645Q8N7E2 425 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 SGMS2Q8NHU3 365 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 VSIG2Q96IQ7 327 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 TM2D3Q9BRN9 247 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 WDR61Q9GZS3 305 aaKnown RBP3.27□□□□□ -1.89
CD44-202ENST00000278385 TAF9BQ9HBM6 251 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 UNC79Q9P2D8 2635 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 PKDREJQ9NTG1 2253 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 DNAJC13O75165 2243 aa3.27□□□□□ -1.89
CD44-202ENST00000278385 HCFC1P51610 2035 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 NAV2Q8IVL1 2488 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 A0A087X002 238 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 LOC102724200A0A096LPH7 203 aaPredicted RBP3.26□□□□□ -1.89
CD44-202ENST00000278385 DHRS12A0PJE2 317 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 J3QQQ9 107 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 EDF1O60869 148 aaKnown RBP3.26□□□□□ -1.89
CD44-202ENST00000278385 DPM2O94777 84 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 FGF7P21781 194 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 ZNF83P51522 516 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 BSPH1Q075Z2 132 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 ZNF181Q2M3W8 571 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 ZNF876PQ49A33 203 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 TEX261Q6UWH6 196 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 PRR15Q8IV56 129 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 MSRB3Q8IXL7 192 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 C8orf59Q8N0T1 100 aaPredicted RBP3.26□□□□□ -1.89
CD44-202ENST00000278385 ACBD7Q8N6N7 88 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 MAL2Q969L2 176 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 HIST1H2BAQ96A08 127 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 SLAMF6Q96DU3 332 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 C2orf50Q96LR7 162 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 GPX7Q96SL4 187 aaPredicted RBP3.26□□□□□ -1.89
CD44-202ENST00000278385 SPIN2AQ99865 258 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 SPIN2BQ9BPZ2 258 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 SLC25A21Q9BQT8 299 aaPredicted RBP3.26□□□□□ -1.89
CD44-202ENST00000278385 GGTLC1Q9BX51 225 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 CBLN4Q9NTU7 201 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 PCNX1Q96RV3 2341 aa3.26□□□□□ -1.89
CD44-202ENST00000278385 EML6Q6ZMW3 1958 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 NCKAP5O14513 1909 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 TRBV20OR9-2A0A075B6H5 130 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 TRAV9-1A0A075B6T8 112 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 A0A087WYN8 130 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 A0A0G2JND7 137 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 A0A1B0GWA3 101 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 E7EQL1 145 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 LY6LH3BQJ8 138 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 RPL36A-HNRNPH2H7BZ11 118 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 SOCS3O14543 225 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 PGLYRP1O75594 196 aaPredicted RBP3.25□□□□□ -1.89
CD44-202ENST00000278385 LY6G6DO95868 133 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 NTF3P20783 257 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 TAS2R20P59543 309 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 HOXC5Q00444 222 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms