RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 ZNF253O75346 499 aa16.96■□□□□ 0.31
CCDC7-201ENST00000277657 S100PP25815 95 aa16.96■□□□□ 0.31
CCDC7-201ENST00000277657 UBE2G1P62253 170 aa16.96■□□□□ 0.31
CCDC7-201ENST00000277657 DUX5Q96PT3 197 aa16.96■□□□□ 0.31
CCDC7-201ENST00000277657 YAE1D1Q9NRH1 226 aa16.96■□□□□ 0.31
CCDC7-201ENST00000277657 MLXQ9UH92 298 aa16.96■□□□□ 0.31
CCDC7-201ENST00000277657 ACANP16112 2415 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 APOHP02749 345 aaPredicted RBP16.95■□□□□ 0.3
CCDC7-201ENST00000277657 PSG9Q00887 426 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 SMIM12Q96EX1 92 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 FAM210BQ96KR6 192 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 ANK3Q12955 4377 aaKnown RBP16.95■□□□□ 0.3
CCDC7-201ENST00000277657 A0A087X0K7 114 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 SLC35B1P78383 322 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 UNQ9165/PRO28630Q6UXU0 137 aa16.95■□□□□ 0.3
CCDC7-201ENST00000277657 LOC105371267A0A1B0GV96 52 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 ERVFC1-1P60608 527 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 FOXE3Q13461 319 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 C1QL4Q86Z23 238 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 AAMDCQ9H7C9 122 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 OSTCQ9NRP0 149 aa16.94■□□□□ 0.3
CCDC7-201ENST00000277657 ZNF207O43670 478 aaKnown RBP16.93■□□□□ 0.3
CCDC7-201ENST00000277657 GGCTO75223 188 aaKnown RBP16.93■□□□□ 0.3
CCDC7-201ENST00000277657 LTAP01374 205 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 ELANEP08246 267 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 FOXL1Q12952 345 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 NHLRC2Q8NBF2 726 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 MLST8Q9BVC4 326 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 PEF1Q9UBV8 284 aaKnown RBP16.93■□□□□ 0.3
CCDC7-201ENST00000277657 TRBV6-1A0A0K0K1D8 114 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 C1orf196B1AJZ1 125 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 IGLV2-11P01706 119 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 MGST1P10620 155 aaKnown RBP16.93■□□□□ 0.3
CCDC7-201ENST00000277657 RPS10P46783 165 aaKnown RBP16.93■□□□□ 0.3
CCDC7-201ENST00000277657 KCNIP4Q6PIL6 250 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 GOLT1AQ6ZVE7 132 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 ARL6IP6Q8N6S5 226 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 RNF152Q8N8N0 203 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 SGK494Q96LW2 274 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 V9GYV3 84 aa16.93■□□□□ 0.3
CCDC7-201ENST00000277657 MYO9AB2RTY4 2548 aa16.92■□□□□ 0.3
CCDC7-201ENST00000277657 FLI1Q01543 452 aaPredicted RBP16.92■□□□□ 0.3
CCDC7-201ENST00000277657 SERTAD4Q9NUC0 356 aa16.92■□□□□ 0.3
CCDC7-201ENST00000277657 IGHV3-66A0A0C4DH42 116 aa16.91■□□□□ 0.3
CCDC7-201ENST00000277657 DIRC3C9JPN6 131 aa16.91■□□□□ 0.3
CCDC7-201ENST00000277657 M0R3E3 92 aa16.91■□□□□ 0.3
CCDC7-201ENST00000277657 RPLP1P05386 114 aaKnown RBP16.91■□□□□ 0.3
CCDC7-201ENST00000277657 RNASE7Q9H1E1 156 aaKnown RBP16.91■□□□□ 0.3
CCDC7-201ENST00000277657 IGHV3OR16-13A0A075B7E8 117 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 IGHV3-74A0A0B4J1X5 117 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 DNAJC9-AS1A6NH13 148 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 Q86TA4 180 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 TMEM75Q8N9X5 138 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 ZNF331Q9NQX6 463 aaPredicted RBP16.9■□□□□ 0.3
CCDC7-201ENST00000277657 FLNBO75369 2602 aaKnown RBP16.9■□□□□ 0.3
CCDC7-201ENST00000277657 RAB5BP61020 215 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 IBA57Q5T440 356 aaKnown RBP16.9■□□□□ 0.3
CCDC7-201ENST00000277657 C16orf54Q6UWD8 224 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 FAM231DQ6ZW35 169 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 IL36BQ9NZH7 164 aa16.9■□□□□ 0.3
CCDC7-201ENST00000277657 IGHV3-49A0A0A0MS15 119 aa16.89■□□□□ 0.29
CCDC7-201ENST00000277657 TRAV8-1A0A0A6YYK1 113 aa16.89■□□□□ 0.29
CCDC7-201ENST00000277657 A0A1W2PPQ1 181 aa16.89■□□□□ 0.29
CCDC7-201ENST00000277657 ZNF785A8K8V0 405 aa16.89■□□□□ 0.29
CCDC7-201ENST00000277657 FAM3BP58499 235 aaPredicted RBP16.89■□□□□ 0.29
CCDC7-201ENST00000277657 GLMPQ8WWB7 406 aa16.89■□□□□ 0.29
CCDC7-201ENST00000277657 TMEM160Q9NX00 188 aa16.89■□□□□ 0.29
CCDC7-201ENST00000277657 K7EQM0 130 aa16.88■□□□□ 0.29
CCDC7-201ENST00000277657 SETXQ7Z333 2677 aaKnown RBP16.88■□□□□ 0.29
CCDC7-201ENST00000277657 SERTM2A0A1B0GWG4 89 aa16.88■□□□□ 0.29
CCDC7-201ENST00000277657 CSN1S1P47710 185 aa16.88■□□□□ 0.29
CCDC7-201ENST00000277657 MEOX2P50222 304 aa16.88■□□□□ 0.29
CCDC7-201ENST00000277657 ZFP82Q8N141 532 aa16.88■□□□□ 0.29
CCDC7-201ENST00000277657 ESM1Q9NQ30 184 aa16.88■□□□□ 0.29
CCDC7-201ENST00000277657 ZNF320A2RRD8 509 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 TYMSP04818 313 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 PSG3Q16557 428 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 GPHB5Q86YW7 130 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 TMEM183AQ8IXX5 376 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 UBE2E2Q96LR5 201 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 SRD5A3Q9H8P0 318 aa16.87■□□□□ 0.29
CCDC7-201ENST00000277657 FAM181BA6NEQ2 426 aa16.86■□□□□ 0.29
CCDC7-201ENST00000277657 SLC50A1Q9BRV3 221 aa16.86■□□□□ 0.29
CCDC7-201ENST00000277657 PRNTQ86SH4 94 aa16.86■□□□□ 0.29
CCDC7-201ENST00000277657 BTF3L4Q96K17 158 aa16.86■□□□□ 0.29
CCDC7-201ENST00000277657 TRAV9-1A0A075B6T8 112 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 K7EMT4 169 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 LGALS1P09382 135 aaKnown RBP16.85■□□□□ 0.29
CCDC7-201ENST00000277657 RPEL1Q2QD12 228 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 FAM106AQ4KMX7 169 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 BIN3Q9NQY0 253 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 DAZ1Q9NQZ3 744 aaKnown RBP16.85■□□□□ 0.29
CCDC7-201ENST00000277657 PSG8Q9UQ74 426 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 ZFP30Q9Y2G7 519 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 OTOGQ6ZRI0 2925 aa16.85■□□□□ 0.29
CCDC7-201ENST00000277657 SCGB2A2Q13296 93 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 IGFL4Q6B9Z1 124 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 Q6ZSV7 163 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms