RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SYS1-DBNDD2H3BUS1 97 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 CDCP2Q5VXM1 449 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 SIPA1L1O43166 1804 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 IGHV1-45A0A0A0MS14 117 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 PRSS57Q6UWY2 283 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 LIME1Q9H400 295 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 LHFPL6Q9Y693 200 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
UBR3-201ENST00000272793 FAM231BA6NCW3 169 aa13.05□□□□□ -0.32
UBR3-201ENST00000272793 FAM90A1Q86YD7 464 aa13.05□□□□□ -0.32
UBR3-201ENST00000272793 SMIM20Q8N5G0 67 aa13.05□□□□□ -0.32
UBR3-201ENST00000272793 TRBV5-5A0A0J9YX44 114 aa13.05□□□□□ -0.32
UBR3-201ENST00000272793 CARD19Q96LW7 228 aa13.05□□□□□ -0.32
UBR3-201ENST00000272793 MRPL23Q16540 153 aaKnown RBP13.05□□□□□ -0.32
UBR3-201ENST00000272793 LINC01551Q86U37 167 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 AMN1Q8IY45 258 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 PRCDQ00LT1 54 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 EFNB3Q15768 340 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 NEGR1Q7Z3B1 354 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 MSRB2Q9Y3D2 182 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 ZNF138P52744 262 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 ZC2HC1BQ5TFG8 222 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
UBR3-201ENST00000272793 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
UBR3-201ENST00000272793 SLAQ13239 276 aa13.03□□□□□ -0.32
UBR3-201ENST00000272793 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
UBR3-201ENST00000272793 PILRAQ9UKJ1 303 aa13.03□□□□□ -0.32
UBR3-201ENST00000272793 PTPRBP23467 1997 aa13.03□□□□□ -0.32
UBR3-201ENST00000272793 TANC1Q9C0D5 1861 aa13.03□□□□□ -0.32
UBR3-201ENST00000272793 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
UBR3-201ENST00000272793 J3QW42 95 aa13.03□□□□□ -0.32
UBR3-201ENST00000272793 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
UBR3-201ENST00000272793 IGHV1OR15-1A0A075B7D0 117 aa13.02□□□□□ -0.32
UBR3-201ENST00000272793 NGFRP08138 427 aa13.02□□□□□ -0.32
UBR3-201ENST00000272793 PIN1P1O15428 100 aa13.02□□□□□ -0.32
UBR3-201ENST00000272793 SH2D1AO60880 128 aa13.02□□□□□ -0.32
UBR3-201ENST00000272793 RMI2Q96E14 147 aa13.02□□□□□ -0.32
UBR3-201ENST00000272793 H0Y9J4 135 aa13.02□□□□□ -0.33
UBR3-201ENST00000272793 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
UBR3-201ENST00000272793 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.33
UBR3-201ENST00000272793 STPG1Q5TH74 334 aa13.02□□□□□ -0.33
UBR3-201ENST00000272793 CFHR4Q92496 578 aa13.02□□□□□ -0.33
UBR3-201ENST00000272793 CEP192Q8TEP8 1941 aa13.02□□□□□ -0.33
UBR3-201ENST00000272793 PATE3B3GLJ2 98 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 CISD3P0C7P0 127 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
UBR3-201ENST00000272793 BUB3O43684 328 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 PSMB8P28062 276 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 DUX4L9Q6RFH8 374 aaPredicted RBP13.01□□□□□ -0.33
UBR3-201ENST00000272793 NUP210Q8TEM1 1887 aaPredicted RBP13.01□□□□□ -0.33
UBR3-201ENST00000272793 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
UBR3-201ENST00000272793 SIGLEC9Q9Y336 463 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 LIMS1P48059 325 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 AMBPP02760 352 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 C1orf194Q5T5A4 169 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 HEPN1Q6WQI6 88 aa13.01□□□□□ -0.33
UBR3-201ENST00000272793 NOTCH4Q99466 2003 aa13□□□□□ -0.33
UBR3-201ENST00000272793 A0A096LPF7 62 aa13□□□□□ -0.33
UBR3-201ENST00000272793 PRR15LQ9BU68 103 aa13□□□□□ -0.33
UBR3-201ENST00000272793 TIMP3P35625 211 aa13□□□□□ -0.33
UBR3-201ENST00000272793 VWC2Q2TAL6 325 aa13□□□□□ -0.33
UBR3-201ENST00000272793 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
UBR3-201ENST00000272793 C9orf118A6NHY6 69 aa13□□□□□ -0.33
UBR3-201ENST00000272793 H3BMG7 143 aa13□□□□□ -0.33
UBR3-201ENST00000272793 CDKN1AP38936 164 aa13□□□□□ -0.33
UBR3-201ENST00000272793 Q8TAT8 98 aa13□□□□□ -0.33
UBR3-201ENST00000272793 LINC00477Q96M19 166 aa13□□□□□ -0.33
UBR3-201ENST00000272793 KIF26AQ9ULI4 1882 aaPredicted RBP12.99□□□□□ -0.33
UBR3-201ENST00000272793 TRBV7-1A0A0A6YYK4 115 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 IGKV3D-7A0A0C4DH55 119 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 TRBV5-3A0A0A0MS03 114 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 V9GYY9 64 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 GATA4P43694 442 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 SLC25A47Q6Q0C1 308 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 ZNF503Q96F45 646 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 Q9HAA7 133 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 DKK1O94907 266 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 SLC25A16P16260 332 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 J3KT08 172 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 CXCL1P09341 107 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
UBR3-201ENST00000272793 TP53TG1Q9Y2A0 90 aa12.99□□□□□ -0.33
UBR3-201ENST00000272793 BAALC-AS2P0C853 105 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 GZMMP51124 257 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 CACNA1HO95180 2353 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 IGKV2D-24A0A075B6R9 120 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 TRBV5-7A0A0A0MS05 114 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 SEM1Q6ZVN7 128 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 PRO1854Q9UHT4 67 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 PLCH1Q4KWH8 1693 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 ETDBQ3ZM63 59 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 C1orf100Q5SVJ3 147 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 CEND1Q8N111 149 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 C9orf47Q6ZRZ4 202 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
UBR3-201ENST00000272793 PSG7Q13046 419 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms