RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 B4DEV8 164 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 ZNF207O43670 478 aaKnown RBP10.79□□□□□ -0.68
SS18-201ENST00000269137 ZNF253O75346 499 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 CRLF1O75462 422 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 APOHP02749 345 aaPredicted RBP10.79□□□□□ -0.68
SS18-201ENST00000269137 SIGLEC15Q6ZMC9 328 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 ZNF320A2RRD8 509 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 HELTA6NFD8 242 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 C9JCJ5 164 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 PEX7O00628 323 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 SLC25A5P05141 298 aaKnown RBP10.79□□□□□ -0.68
SS18-201ENST00000269137 RPL35P42766 123 aaKnown RBP10.79□□□□□ -0.68
SS18-201ENST00000269137 GALR1P47211 349 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 RPEL1Q2QD12 228 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 C16orf54Q6UWD8 224 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
SS18-201ENST00000269137 DAZ1Q9NQZ3 744 aaKnown RBP10.79□□□□□ -0.68
SS18-201ENST00000269137 TRBV20OR9-2A0A075B6H5 130 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 A0A1W2PS18 150 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 TCF21O43680 179 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 MEOX2P50222 304 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 PSG9Q00887 426 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 FAM24BQ8N5W8 94 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 C4orf3Q8WVX3 66 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 LY96Q9Y6Y9 160 aa10.78□□□□□ -0.68
SS18-201ENST00000269137 SLC17A3O00476 420 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 RPL23P62829 140 aaKnown RBP10.77□□□□□ -0.68
SS18-201ENST00000269137 REC114Q7Z4M0 266 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 GLMPQ8WWB7 406 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 GRAMD2BQ96HH9 432 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 ATG101Q9BSB4 218 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 SAV1Q9H4B6 383 aaPredicted RBP10.77□□□□□ -0.68
SS18-201ENST00000269137 BIN3Q9NQY0 253 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 UFC1Q9Y3C8 167 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.68
SS18-201ENST00000269137 IGHV4OR15-8A0A075B7B6 117 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 IGHV3OR16-13A0A075B7E8 117 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 A0A087WW49 117 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 IGHV3-49A0A0A0MS15 119 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 IGHV3-74A0A0B4J1X5 117 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 IGHV3-66A0A0C4DH42 116 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 C1orf196B1AJZ1 125 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 LGALS9O00182 355 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 RAB5AP20339 215 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.69
SS18-201ENST00000269137 TAS2R60P59551 318 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 RAB5BP61020 215 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 EXOC3-AS1Q8N2X6 119 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 ARL6IP6Q8N6S5 226 aa10.77□□□□□ -0.69
SS18-201ENST00000269137 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 ZNF785A8K8V0 405 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 TCRAP04437 139 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 S100A9P06702 114 aaKnown RBP10.76□□□□□ -0.69
SS18-201ENST00000269137 GNG5P63218 68 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 ADIRFQ15847 76 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 CMTM2Q8TAZ6 248 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
SS18-201ENST00000269137 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
SS18-201ENST00000269137 A8MWP6 167 aa10.75□□□□□ -0.69
SS18-201ENST00000269137 HOXD3P31249 432 aaPredicted RBP10.75□□□□□ -0.69
SS18-201ENST00000269137 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
SS18-201ENST00000269137 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.75□□□□□ -0.69
SS18-201ENST00000269137 GNG4P50150 75 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 KLF5Q13887 457 aaPredicted RBP10.74□□□□□ -0.69
SS18-201ENST00000269137 CENPWQ5EE01 88 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 OCC1Q8TAD7 63 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 IGF2BP2-AS1Q96M15 143 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
SS18-201ENST00000269137 PRELID1Q9Y255 219 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 LINC01619G3V211 115 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 CHEK1O14757 476 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 BMI1P35226 326 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 C1QL4Q86Z23 238 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 SLC50A1Q9BRV3 221 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 TMEM242Q9NWH2 141 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
SS18-201ENST00000269137 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 PROK1P58294 105 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 KLHL30-AS1Q8NEE0 82 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 OR1N2Q8NGR9 330 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 CTDSP1Q9GZU7 261 aa10.73□□□□□ -0.69
SS18-201ENST00000269137 TRBV6-1A0A0K0K1D8 114 aa10.72□□□□□ -0.69
SS18-201ENST00000269137 PGPEP1LA6NFU8 196 aa10.72□□□□□ -0.69
SS18-201ENST00000269137 DIRC3C9JPN6 131 aa10.72□□□□□ -0.69
SS18-201ENST00000269137 ISLRO14498 428 aa10.72□□□□□ -0.69
SS18-201ENST00000269137 CD28P10747 220 aa10.72□□□□□ -0.69
SS18-201ENST00000269137 CSN1S1P47710 185 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms