RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 LYPD2Q6UXB3 125 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RNASE6Q93091 150 aaKnown RBP12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TRAV26-1A0A087WT03 109 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
MAP1LC3B-201ENST00000268607 IGHV3-48P01763 117 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CSN3P07498 182 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PRNDQ9UKY0 176 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TSSC4Q9Y5U2 329 aaPredicted RBP12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PLXNB1O43157 2135 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TEX50A0A1B0GTY4 177 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CD69Q07108 199 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 LINC01545Q5VT33 79 aa12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RPP21Q9H633 154 aaKnown RBP12.74□□□□□ -0.37
MAP1LC3B-201ENST00000268607 UBR5O95071 2799 aaPredicted RBP12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 ARHGAP32A7KAX9 2087 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 A0A1W2PPR1 153 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RNASE2P10153 161 aaKnown RBP12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 FGF6P10767 208 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PRB3Q04118 309 aaPredicted RBP12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 BLNKQ8WV28 456 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TMUB1Q9BVT8 246 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 HELZ2Q9BYK8 2649 aaKnown RBP12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 FBN2P35556 2912 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 NCR2O95944 276 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CRYBA4P53673 196 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 C2orf83Q53S99 150 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TEX36Q5VZQ5 186 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PATE2Q6UY27 113 aa12.73□□□□□ -0.37
MAP1LC3B-201ENST00000268607 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 UPK2O00526 184 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 SLC25A5P05141 298 aaKnown RBP12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CD3EP07766 207 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 OR5AL1P0C617 328 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CT45A6P0DMU7 189 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CT45A5P0DMU8 189 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CT45A7P0DMV0 189 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CKS1BP61024 79 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PSG3Q16557 428 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 HSPB8Q9UJY1 196 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 MOSP00540 346 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 DYNLRB1Q9NP97 96 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 WNK2Q9Y3S1 2297 aa12.72□□□□□ -0.37
MAP1LC3B-201ENST00000268607 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CHEK1O14757 476 aa12.71□□□□□ -0.37
MAP1LC3B-201ENST00000268607 DLX1P56177 255 aa12.71□□□□□ -0.37
MAP1LC3B-201ENST00000268607 TMEM200BQ69YZ2 307 aa12.71□□□□□ -0.37
MAP1LC3B-201ENST00000268607 CCDC144NLQ6NUI1 221 aa12.71□□□□□ -0.37
MAP1LC3B-201ENST00000268607 ZNF257Q9Y2Q1 563 aa12.71□□□□□ -0.37
MAP1LC3B-201ENST00000268607 A8MWL6 223 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 TMEM178BH3BS89 294 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 P01737 135 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 FABP2P12104 132 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 DIAPH2-AS1Q14236 149 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 CD300EQ496F6 205 aaPredicted RBP12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 TMEM177Q53S58 311 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 EPDR1Q9UM22 224 aa12.71□□□□□ -0.38
MAP1LC3B-201ENST00000268607 PGPA6NDG6 321 aa12.7□□□□□ -0.38
MAP1LC3B-201ENST00000268607 ZNF714Q96N38 554 aa12.7□□□□□ -0.38
MAP1LC3B-201ENST00000268607 GPR82Q96P67 336 aa12.7□□□□□ -0.38
MAP1LC3B-201ENST00000268607 SLC25A48Q6ZT89 311 aaKnown RBP12.7□□□□□ -0.38
MAP1LC3B-201ENST00000268607 STXBP6Q8NFX7 210 aa12.7□□□□□ -0.38
MAP1LC3B-201ENST00000268607 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 TM4SF20Q53R12 229 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 OR1L8Q8NGR8 309 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 NEU4Q8WWR8 484 aaPredicted RBP12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 PRSS22Q9GZN4 317 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 RAB9BQ9NP90 201 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 NGBQ9NPG2 151 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 LINC00312Q9Y6C7 94 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 ABCA1O95477 2261 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 MYCNOSP40205 109 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 PDPNQ86YL7 162 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 MLST8Q9BVC4 326 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 CTSZQ9UBR2 303 aa12.69□□□□□ -0.38
MAP1LC3B-201ENST00000268607 SAA1P0DJI8 122 aaPredicted RBP12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 SAMD5Q5TGI4 173 aa12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 RBPMS2Q6ZRY4 209 aaKnown RBP12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 LINC00305Q7Z4B0 112 aa12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 NPIPB3Q92617 1050 aa12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 NAV3Q8IVL0 2385 aa12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 TMEM189A5PLL7 270 aa12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 H3BTX0 84 aa12.68□□□□□ -0.38
MAP1LC3B-201ENST00000268607 A1L4Q6 167 aa12.67□□□□□ -0.38
MAP1LC3B-201ENST00000268607 E7EUB6 86 aa12.67□□□□□ -0.38
MAP1LC3B-201ENST00000268607 FSTL3O95633 263 aa12.67□□□□□ -0.38
MAP1LC3B-201ENST00000268607 MC5RP33032 325 aa12.67□□□□□ -0.38
MAP1LC3B-201ENST00000268607 ADAMTSL5Q6ZMM2 481 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms