RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 K7ERJ3 54 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 NXPH4O95158 308 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 COL8A2P25067 703 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 LHFPL1Q86WI0 220 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 TMEM126AQ9H061 195 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 CSRP2Q16527 193 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 C15orf62A8K5M9 175 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 E9PLN8 166 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 VCYO14598 125 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 SYNJ2BPP57105 145 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 CLPSL2Q6UWE3 100 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 IFITM1P13164 125 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 GAGE12JA6NER3 117 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 GAGE4Q13068 117 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 GAGE5Q13069 117 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 TRAV12-2A0A075B6T6 113 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 ETDBQ3ZM63 59 aa13.65□□□□□ -0.22
TSPAN3-201ENST00000267970 UBR3Q6ZT12 1888 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 TMEM178BH3BS89 294 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 SNHG12Q9BXW3 62 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 TP53TG1Q9Y2A0 90 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 SLC25A16P16260 332 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 Q0VFX4 171 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 SSC4DQ8WTU2 575 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 GAFA1Q96PS6 74 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 CD5LO43866 347 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 IL18BPO95998 194 aa13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 PNRC2Q9NPJ4 139 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-201ENST00000267970 DTX2Q86UW9 622 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 C1orf43Q9BWL3 253 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 SPINK13Q1W4C9 94 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 TRBV20-1A0A075B6N2 111 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 BUB1B-PAK6H3BSN5 160 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 TCTEX1D4Q5JR98 221 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 DNAJC30Q96LL9 226 aa13.63□□□□□ -0.23
TSPAN3-201ENST00000267970 OVOL3O00110 214 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 Q6ZVH6 145 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 RHPN1-AS1Q9BWJ2 59 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 PLXNA1Q9UIW2 1896 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 RBBP6Q7Z6E9 1792 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 SOCS3O14543 225 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 TMEM14EPQ6UXP3 125 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 TRGV9Q99603 122 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 PMVKQ15126 192 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 IGKV1D-17A0A075B6S4 117 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 AZU1P20160 251 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 GNLYP22749 145 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 RASL11AQ6T310 242 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 LIME1Q9H400 295 aa13.62□□□□□ -0.23
TSPAN3-201ENST00000267970 DEFB131AP59861 70 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 Q71RC1 249 aaPredicted RBP13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 DOPEY2Q9Y3R5 2298 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 RBM3P98179 157 aaKnown RBP13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 Q86TA4 180 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 SPACA3Q8IXA5 215 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 SCN4AP35499 1836 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 MYMXA0A1B0GTQ4 84 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 A8MWP6 167 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 SRRM5B3KS81 715 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 BOD1L2Q8IYS8 172 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 Q6P435 159 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 SIGLEC9Q9Y336 463 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 SPRY2O43597 315 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
TSPAN3-201ENST00000267970 A0A0G2JNJ9 132 aa13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 Q9UFV3 132 aa13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 SPSB3Q6PJ21 355 aa13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 FBLN5Q9UBX5 448 aa13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 NDUFS5O43920 106 aa13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 DUX4L9Q6RFH8 374 aaPredicted RBP13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 MRPS18CQ9Y3D5 142 aaKnown RBP13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 ATP6V0BQ99437 205 aa13.6□□□□□ -0.23
TSPAN3-201ENST00000267970 FAM90A9PA6NNJ1 464 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 C5orf64Q2M2E5 130 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 ARFGEF3Q5TH69 2177 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 hADV29S1A0JD25 119 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 B5MCH6 92 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 GAGE6Q13070 117 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 GBF1Q92538 1859 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 CADP27708 2225 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 PTPRDP23468 1912 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 H3BMG7 143 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 RNASE2P10153 161 aaKnown RBP13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 FGF6P10767 208 aa13.59□□□□□ -0.23
TSPAN3-201ENST00000267970 CLPSP04118 112 aa13.58□□□□□ -0.24
TSPAN3-201ENST00000267970 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
TSPAN3-201ENST00000267970 KLF2Q9Y5W3 355 aaPredicted RBP13.58□□□□□ -0.24
TSPAN3-201ENST00000267970 IGLV3-12A0A075B6K2 115 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 LOC102723996A0A087X1L8 192 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 SS18Q15532 418 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms