RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PSG3Q16557 428 aa14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 PRB3Q04118 309 aaPredicted RBP14.36□□□□□ -0.11
NOTCH3-201ENST00000263388 MYMXA0A1B0GTQ4 84 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 IGHV1-8P0DP01 117 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 RPUSD1Q9UJJ7 312 aaKnown RBP14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 RCHY1Q96PM5 261 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 IGKV1D-8A0A087WSZ0 117 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 A6NNC1 897 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 USMG5Q96IX5 58 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 SCRT1Q9BWW7 348 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 A0A1B0GWJ7 208 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 CDKN1AP38936 164 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 A0A087WV48 116 aa14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 SRSF8Q9BRL6 282 aaKnown RBP14.35□□□□□ -0.11
NOTCH3-201ENST00000263388 SRRM4A7MD48 611 aaKnown RBP14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 SELLP14151 372 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 KIR3DS1Q14943 382 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 UBE2WQ96B02 151 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 ANAPC10Q9UM13 185 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 TMEM14EPQ6UXP3 125 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 HAPLN4Q86UW8 402 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 VMO1Q7Z5L0 202 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 WDR87Q6ZQQ6 2873 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 TRBV6-6A0A0A6YYG2 114 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 GAS1P54826 345 aa14.34□□□□□ -0.11
NOTCH3-201ENST00000263388 TRBV20-1A0A075B6N2 111 aa14.33□□□□□ -0.11
NOTCH3-201ENST00000263388 IGHV1-3A0A0C4DH29 117 aa14.33□□□□□ -0.11
NOTCH3-201ENST00000263388 SYS1-DBNDD2H3BUS1 97 aa14.33□□□□□ -0.11
NOTCH3-201ENST00000263388 TMEM178BH3BS89 294 aa14.33□□□□□ -0.11
NOTCH3-201ENST00000263388 VSIRQ9H7M9 311 aa14.33□□□□□ -0.11
NOTCH3-201ENST00000263388 A0A0U1RRA0 63 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 M0R1W7 72 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 PDE6HQ13956 83 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 CD5LO43866 347 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 ZFP36L1Q07352 338 aaKnown RBP14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 RPP25LQ8N5L8 163 aaKnown RBP14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 DLEU1O43261 78 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 PSCAO43653 123 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 RPL36AP83881 106 aaKnown RBP14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 RPL36ALQ969Q0 106 aaKnown RBP14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 NABP1Q96AH0 204 aa14.33□□□□□ -0.12
NOTCH3-201ENST00000263388 TRAV8-3A0A0A6YYJ7 113 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 FAM223BA6NKX1 122 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 FAM223AQ8IWN6 122 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 GLRX5Q86SX6 157 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 TIMM21Q9BVV7 248 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 GFRA4Q9GZZ7 299 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 IGKV1-27A0A075B6S5 117 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 ATG2AQ2TAZ0 1938 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 LYZL1Q6UWQ5 148 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 LCN12Q6JVE5 192 aa14.32□□□□□ -0.12
NOTCH3-201ENST00000263388 C9orf139Q6ZV77 190 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 NEGR1Q7Z3B1 354 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 H0YJW9 148 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 C6orf226Q5I0X4 101 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 ZCCHC24Q8N2G6 241 aaKnown RBP14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 A0A087X0K7 114 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 SOCS3O14543 225 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 C1QTNF4Q9BXJ3 329 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 IGKV1-12A0A0C4DH73 117 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 IGKV1D-12P01611 117 aa14.31□□□□□ -0.12
NOTCH3-201ENST00000263388 TRACP01848 142 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 TCRAP04437 139 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 Q6ZS49 121 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 LYL1P12980 280 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 SNHG12Q9BXW3 62 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 NCR2O95944 276 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 SS18Q15532 418 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 C5orf64Q2M2E5 130 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 SH2D1AO60880 128 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 CRIM1Q9NZV1 1036 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 IFITM1P13164 125 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 BUB1B-PAK6H3BSN5 160 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 NCOR1P1Q9H4R4 102 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 CYTL1Q9NRR1 136 aa14.3□□□□□ -0.12
NOTCH3-201ENST00000263388 ADAMTSL5Q6ZMM2 481 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 C20orf204Q6ZNR8 217 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 CD33P20138 364 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 CSTL1Q9H114 145 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 FGFBP3Q8TAT2 258 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 ZNF672Q499Z4 452 aaPredicted RBP14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 TFF1P04155 84 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 PNRC2Q9NPJ4 139 aaKnown RBP14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 MUC4Q99102 2169 aa14.29□□□□□ -0.12
NOTCH3-201ENST00000263388 FOXF2Q12947 444 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 ZNF876PQ49A33 203 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 THSD7BQ9C0I4 1608 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 REG4Q9BYZ8 158 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 hDV102S1A0JD36 115 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 LTBRP36941 435 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 UBL5Q9BZL1 73 aa14.28□□□□□ -0.12
NOTCH3-201ENST00000263388 TRGV1A0A0A0MS02 117 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 VWCEQ96DN2 955 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 C9JAW5 83 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 IGKV1-5P01602 117 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 TMEM219Q86XT9 240 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 PTPRBP23467 1997 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 SIGLEC9Q9Y336 463 aa14.27□□□□□ -0.12
NOTCH3-201ENST00000263388 TMEM258P61165 79 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms