RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SLC17A3O00476 420 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 ZNF253O75346 499 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.25
NIP7-202ENST00000254941 GALR1P47211 349 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 PROK1P58294 105 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 PNRC1Q12796 327 aaPredicted RBP7.21□□□□□ -1.25
NIP7-202ENST00000254941 ZNF674Q2M3X9 581 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 TM4SF20Q53R12 229 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 SIGLEC15Q6ZMC9 328 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 REC114Q7Z4M0 266 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 C5orf17Q8NAS9 161 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 CLRN3Q8NCR9 226 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 GLMPQ8WWB7 406 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 HIST1H2BAQ96A08 127 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 TVP23CQ96ET8 276 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 SDF2L1Q9HCN8 221 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 UFC1Q9Y3C8 167 aa7.21□□□□□ -1.25
NIP7-202ENST00000254941 IGHV7-4-1A0A0J9YVY3 117 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 A8MWP6 167 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 ATF4P18848 351 aaPredicted RBP7.21□□□□□ -1.26
NIP7-202ENST00000254941 TMEM241Q24JQ0 296 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 KHDC1LQ5JSQ8 128 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 KLHL30-AS1Q8NEE0 82 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 GRAMD2BQ96HH9 432 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 NAT8Q9UHE5 227 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 EPDR1Q9UM22 224 aa7.21□□□□□ -1.26
NIP7-202ENST00000254941 TRBV20OR9-2A0A075B6H5 130 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 TMEM213A2RRL7 107 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 HELTA6NFD8 242 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 LINC01619G3V211 115 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 M0R036 132 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 PEX7O00628 323 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 SCO1O75880 301 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 SLC25A5P05141 298 aaKnown RBP7.2□□□□□ -1.26
NIP7-202ENST00000254941 CD28P10747 220 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
NIP7-202ENST00000254941 MEOX2P50222 304 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 PSG9Q00887 426 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 KLF5Q13887 457 aaPredicted RBP7.2□□□□□ -1.26
NIP7-202ENST00000254941 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 AWAT1Q58HT5 328 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 OR11H1Q8NG94 326 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 SMPXQ9UHP9 88 aa7.2□□□□□ -1.26
NIP7-202ENST00000254941 ZNF785A8K8V0 405 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 C9JCJ5 164 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 CHEK1O14757 476 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 SYNJ2BPP57105 145 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
NIP7-202ENST00000254941 RHEBQ15382 184 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 C1QL4Q86Z23 238 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 OR1N2Q8NGR9 330 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 CITED2Q99967 270 aaPredicted RBP7.19□□□□□ -1.26
NIP7-202ENST00000254941 ATG101Q9BSB4 218 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 RHPN1-AS1Q9BWJ2 59 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 AAMDCQ9H7C9 122 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 ZNF331Q9NQX6 463 aaPredicted RBP7.19□□□□□ -1.26
NIP7-202ENST00000254941 KLF12Q9Y4X4 402 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 TSSC4Q9Y5U2 329 aaPredicted RBP7.19□□□□□ -1.26
NIP7-202ENST00000254941 C7orf77A4D0Y5 90 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 B4DEV8 164 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 TCRAP04437 139 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 GNG5P63218 68 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 ARL6IP6Q8N6S5 226 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 CMTM2Q8TAZ6 248 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 DPF1Q92782 380 aa7.19□□□□□ -1.26
NIP7-202ENST00000254941 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 A0A1B0GUS0 222 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 BMI1P35226 326 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 AKR1C3P42330 323 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 CNN1P51911 297 aaKnown RBP7.18□□□□□ -1.26
NIP7-202ENST00000254941 SLURP1P55000 103 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 TAS2R60P59551 318 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 RPL23P62829 140 aaKnown RBP7.18□□□□□ -1.26
NIP7-202ENST00000254941 HIST2H2BDQ6DRA6 164 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 SLC50A1Q9BRV3 221 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 LY96Q9Y6Y9 160 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 SORL1Q92673 2214 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 ATRQ13535 2644 aa7.18□□□□□ -1.26
NIP7-202ENST00000254941 M0R3E3 92 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 EDN2P20800 178 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 CBLN1P23435 193 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 GNG4P50150 75 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 FHL3Q13643 280 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 ADIRFQ15847 76 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 TMEM183BQ1AE95 376 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 CENPWQ5EE01 88 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 OCC1Q8TAD7 63 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 IGF2BP2-AS1Q96M15 143 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 DUX3Q96PT4 197 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 RPS10P5Q9NQ39 176 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 A0A087WWC5 75 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 TRAV34A0A0B4J273 112 aa7.17□□□□□ -1.26
NIP7-202ENST00000254941 PGPEP1LA6NFU8 196 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms