RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CELSR1Q9NYQ6 3014 aa13.59□□□□□ -0.23
LRFN3-201ENST00000246529 NPIPB6E9PJ23 425 aa13.59□□□□□ -0.23
LRFN3-201ENST00000246529 EFNA4P52798 201 aa13.59□□□□□ -0.23
LRFN3-201ENST00000246529 ZNF124Q15973 351 aa13.59□□□□□ -0.23
LRFN3-201ENST00000246529 RNASEKQ6P5S7 137 aaKnown RBP13.59□□□□□ -0.23
LRFN3-201ENST00000246529 VAMP8Q9BV40 100 aa13.59□□□□□ -0.23
LRFN3-201ENST00000246529 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
LRFN3-201ENST00000246529 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.23
LRFN3-201ENST00000246529 C3orf79P0CE67 100 aa13.58□□□□□ -0.23
LRFN3-201ENST00000246529 RBPMS2Q6ZRY4 209 aaKnown RBP13.58□□□□□ -0.23
LRFN3-201ENST00000246529 OOSP1A8MZH6 123 aa13.58□□□□□ -0.24
LRFN3-201ENST00000246529 SAA4P35542 130 aa13.58□□□□□ -0.24
LRFN3-201ENST00000246529 KLF5Q13887 457 aaPredicted RBP13.58□□□□□ -0.24
LRFN3-201ENST00000246529 SNHG12Q9BXW3 62 aa13.58□□□□□ -0.24
LRFN3-201ENST00000246529 PRORYQ9H606 182 aa13.58□□□□□ -0.24
LRFN3-201ENST00000246529 CRIP1P50238 77 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 LMO4P61968 165 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 PSG3Q16557 428 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
LRFN3-201ENST00000246529 TMEM75Q8N9X5 138 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 C8orf49Q96NF6 230 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 TMEM238LA0A1B0GVL6 79 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 CTSGP08311 255 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 FAM106CPP0CH98 169 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 ECSCRQ19T08 205 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 URB1-AS1Q96HZ7 61 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 C2orf88Q9BSF0 95 aa13.57□□□□□ -0.24
LRFN3-201ENST00000246529 OVOL3O00110 214 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 HSBP1O75506 76 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 PMCHL1Q16048 86 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 LCN12Q6JVE5 192 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 TMUB1Q9BVT8 246 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 CACNA1BQ00975 2339 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 LINC01548A6NM66 108 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 UBE2E1P51965 193 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 ZNF48Q96MX3 618 aaPredicted RBP13.56□□□□□ -0.24
LRFN3-201ENST00000246529 GFRA4Q9GZZ7 299 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 THYN1Q9P016 225 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 RNF24Q9Y225 148 aa13.56□□□□□ -0.24
LRFN3-201ENST00000246529 C16orf54Q6UWD8 224 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 C20orf144Q9BQM9 153 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 C1RLQ9NZP8 487 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 M0R2Z0 102 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 BTF3P20290 206 aaKnown RBP13.55□□□□□ -0.24
LRFN3-201ENST00000246529 ATOH7Q8N100 152 aa13.55□□□□□ -0.24
LRFN3-201ENST00000246529 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
LRFN3-201ENST00000246529 IGHV3OR16-10A0A075B7F0 116 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 IGKV2-40A0A087WW87 121 aaPredicted RBP13.54□□□□□ -0.24
LRFN3-201ENST00000246529 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 K7EQM0 130 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 ATP6V0E1O15342 81 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 IGKV2D-40P01614 121 aaPredicted RBP13.54□□□□□ -0.24
LRFN3-201ENST00000246529 APOHP02749 345 aaPredicted RBP13.54□□□□□ -0.24
LRFN3-201ENST00000246529 UNQ5815/PRO19632Q6UWF5 114 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 BORCS7Q96B45 105 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 TPPP3Q9BW30 176 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 HLA-DMBP28068 263 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 GPR183P32249 361 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 ZFP30Q9Y2G7 519 aa13.54□□□□□ -0.24
LRFN3-201ENST00000246529 G3V318 75 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 CHEK1O14757 476 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 ARMS2P0C7Q2 107 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 C15orf32Q32M92 178 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 EBLN2Q6P2I7 272 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 AAMDCQ9H7C9 122 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 SOX21Q9Y651 276 aaPredicted RBP13.53□□□□□ -0.24
LRFN3-201ENST00000246529 SMAD5-AS1Q9Y6J3 95 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 FAM181BA6NEQ2 426 aa13.53□□□□□ -0.24
LRFN3-201ENST00000246529 TMSB15BA0A087X1C1 80 aa13.52□□□□□ -0.24
LRFN3-201ENST00000246529 MAJINQ3KP22 176 aa13.52□□□□□ -0.24
LRFN3-201ENST00000246529 MIEN1Q9BRT3 115 aa13.52□□□□□ -0.24
LRFN3-201ENST00000246529 CLEC5AQ9NY25 188 aa13.52□□□□□ -0.24
LRFN3-201ENST00000246529 FAM231BA6NCW3 169 aa13.52□□□□□ -0.25
LRFN3-201ENST00000246529 ZNF138P52744 262 aa13.52□□□□□ -0.25
LRFN3-201ENST00000246529 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 LOC102724200A0A096LPH7 203 aaPredicted RBP13.51□□□□□ -0.25
LRFN3-201ENST00000246529 HAX1O00165 279 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 IGHV4-39P01824 125 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 RHOGP84095 191 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 PDE6HQ13956 83 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 SPATA45Q537H7 98 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 RABAC1Q9UI14 185 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 TMEM219Q86XT9 240 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 Q8TAT8 98 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
LRFN3-201ENST00000246529 IGHV3-66A0A0C4DH42 116 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 M0R143 59 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 NPFFO15130 113 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 CLEC3BP05452 202 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 SFTPCP11686 197 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 RAB4AP20338 218 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 LBHQ53QV2 105 aaPredicted RBP13.5□□□□□ -0.25
LRFN3-201ENST00000246529 SPATA12Q7Z6I5 190 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 S100A7AQ86SG5 101 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 FAM110DQ8TAY7 271 aaPredicted RBP13.5□□□□□ -0.25
LRFN3-201ENST00000246529 MAP1AP78559 2803 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms